Protein Overview: elB-PA

General Information:
Name(s) found:	elB-PA / FBpp0080208 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|75027072\|sp\|Q9VJS8.3\|ELBOW_DROME RecName: Full=Zinc finger protein Elbow [NCBI NR] gi\|28574441\|ref\|NP_523566.3\| elbow B, isoform A [Drosophila melanogaster] [NCBI NR] gi\|28380370\|gb\|AAF53395.3\| elbow B, isoform A [Drosophila melanogaster] [NCBI NR] Zinc finger protein Elbow OS=Drosophila melanogaster GN=elB PE=1 SV=3 [Swiss-Prot] The gene elbow B is referred to in FlyBase by the symbol Dmel\elB (CG4220, FBgn0004858). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:14387122..14409547. It has the cytological map location 35B1. Based on sequence similarity, it is predicted to have molecular function</span>: RNA polymerase II transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: eye-antennal disc development; cell proliferation; Notch signaling pathway; open tracheal system development. 38 alleles are reported. The phenotypes of these alleles are annotated with 14 unique terms, many of which group under: adult segment; organ system; adult mesothoracic segment; embryonic/larval tracheal system; peripheral nervous system; portion of tissue; thoracic segment; nervous system; tracheal system; embryonic dorsal branch; embryonic/larval visceral branch; embryonic ganglionic branch; external compound sense organ. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase] >CG4220-PA translation from_gene[CG4220 elB FBgn0004858] seq_release:3 mol_weight=70117 cds_boundaries:(2L:14,373,334..14,389,910[-]) aa_length:678 transcript_info:[CG4220-RA seq_release:3] gene_info:[gene symbol:elB FBgn0004858 gene_boundaries:(2L:14, [hmr_yeast5_DM3-1_pombe.fasta] (AAF53395) CG4220-PA [DrosMelano7227.FASTAC.txt] CG4220-PA, isoform A [Drosophila melanogaster]gi\|28574441\|ref\|NP_523566.3\| CG4220-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas] type=protein; loc=2L:complement(14391179..14391999,14392230..14393061,14394330..14394549,14407595..14407758); ID=FBpp0080208; name=elB-PA; parent=FBgn0004858,FBtr0080635; dbxref=FlyBase:FBpp0080208,FlyBase_Annotation_IDs:CG4220-PA,GB_protein:AAF53395.3,RE [fly-100309-contam.fasta] elbow B CG4220-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta] CG4220-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=2L:complement(14391179..14391999,14392230..14393061,14394330..14394549,14407595..14407758); ID=FBpp0080208; name=elB-PA; parent=FBgn0004858,FBtr0080635; dbxref=FlyBase:FBpp0080208,FlyBase_Annotation_IDs:CG4220-PA,GB_protein:AAF53395.3,REFSEQ:NP_523566,GB_protein:AAF53395; MD5=028734407c7ee904524039ceec541586; length=678; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=2L:complement(14391179..14391999,14392230..14393061,14394330..14394549,14407595..14407758); ID=FBpp0080208; name=elB-PA; parent=FBgn0004858,FBtr0080635; dbxref=FlyBase:FBpp0080208,FlyBase_Annotation_IDs:CG4220-PA,GB_protein:AAF53395.3,REFSEQ:NP_523566,GB_protein:AAF53395; MD5=028734407c7ee904524039ceec541586; length=678; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
Organism:	Drosophila melanogaster
Length:	678 amino acids
Gene Ontology:
Cellular Component:	nucleus [ISS] intracellular [IEA]
Biological Process:	cell proliferation [IGI] Notch signaling pathway [IMP] eye-antennal disc development [IMP] open tracheal system development [IMP]
Molecular Function:	zinc ion binding [IEA] RNA polymerase II transcription factor activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTVSTRHWR NMYETTAPIR NEQPPPNFQK TLGHVLAKRN CFAGSGKRQI ANSQSHATYP  60
   61 YVIIFNVAVS ARCSWAMSYE RSTLASVSGF PFPLPQRLLL LFLLAIIYGM RRNGFYCKYR 120
  121 VSCLWHKTQL DNKSSPLALL AQTCSAIGAD TTNPKLLAAN IEKSTKQLQH HPKGSSGSGG 180
  181 SGSFGLSQQA SMDGSARDKS SPVSSHSSSV STGSVEQQQL PPAHGSSSSS KPTPTTFKPY 240
  241 EPNNNISNIT TAADCGATNL SSNNTSAQQR VKTPKSMTNG GGQRCDSNQS ASSQHRESPT 300
  301 AAGSLRRTPT SGLAGGVMQH NGSPGLPPTA STTPGRSNSK ESAAMHSPSA AAAAAAAAAQ 360
  361 IASSNRLQEA ALAAAKEANY VKALHAASQQ GSASAAAAAA SYYPPVGLNR AATVSKTNFP 420
  421 HNSVAGYGSP YSMDLMTASS LMSPHHAMFK ASAMNPYLNY ARMKGLTEQS MMAATPNVCR 480
  481 DPYCTGCPAS PHYINKAAGQ PCPAGCPQCE GGGGGGGGSS KSSGSQGGSG GSSSAAAAAA 540
  541 AAAASSYHAQ LAALAAASQM PYVCSWIGSD AAYCGKRFGT SDDLFQHLRT HTASVPDAVL 600
  601 SAAAAGGIPP NHPLFQRTYP TPPLSPLSAA RYHPYGKPSM LPPSLAPPGM PGLPPHPALA 660
  661 QYFAPYSLYG PRMGSSHP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.44

Protein Overview: elB-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: