Protein Overview: nimC1-PA

General Information:
Name(s) found:	nimC1-PA / FBpp0080188 [FlyBase]
Description(s) found: SHOW ONLY BEST	gb\|AAF44843.1\| symbol=BG:DS00180.10; cDNA=method:''sim4'', score:''1000.0'', desc:''LP05465 LP Drosophila melanogaster larvae-early pupae pOT2 cDNA clone LP05465 5prime, mRNA sequence: AI257173''; prediction=method:''genscan'', version:''1.0; Date run: 25 [NCBI NR] gi\|22946462\|gb\|AAF53364.2\| nimrod C1 [Drosophila melanogaster] [NCBI NR] gi\|19921312\|ref\|NP_609693.1\| nimrod C1 [Drosophila melanogaster] [NCBI NR] The gene nimrod C1 is referred to in FlyBase by the symbol Dmel\nimC1 (CG8942, FBgn0259896). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:13974117..13976753. It has the cytological map location 34E5. Based on sequence similarity, it is predicted to have molecular function</span>: Wnt-protein binding. There is experimental evidence that it is involved in the biological process</span>: phagocytosis. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase] >CG8942-PA translation from_gene[CG8942 BG:DS00180.10 FBgn0028545] seq_release:3 mol_weight=67954 cds_boundaries:(2L:13,956,385..13,958,841[-]) aa_length:620 transcript_info:[CG8942-RA seq_release:3] gene_info:[gene symbol:BG:DS00180.10 FBgn0028545 gen [hmr_yeast5_DM3-1_pombe.fasta] (Q9VJU5) CG8942 protein (BG:DS00180.10 protein) [DrosMelano7227.FASTAC.txt] CG8942-PA [Drosophila melanogaster]gi\|7287805\|gb\|AAF44843.1\| symbol=BG:DS00180.10; cDNA=method:''sim4'', score:''1000.0'', desc:''LP05465 LP Drosophila melanogaster larvae-early pupae pOT2 cDNA clone LP05465 5prime, mRNA sequence: AI257173''; prediction= [nrdb_11152004_Chlamydomonas] type=protein; loc=2L:complement(13974230..13975879,13976477..13976689); ID=FBpp0080188; name=nimC1-PA; parent=FBgn0259896,FBtr0080615; dbxref=FlyBase:FBpp0080188,FlyBase_Annotation_IDs:CG8942-PA,GB_protein:AAF53364.2,REFSEQ:NP_609693,GB_protein:AAF53364; [fly-100309-contam.fasta] CG8942-PA [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=2L:complement(13974230..13975879,13976477..13976689); ID=FBpp0080188; name=nimC1-PA; parent=FBgn0259896,FBtr0080615; dbxref=FlyBase:FBpp0080188,FlyBase_Annotation_IDs:CG8942-PA,GB_protein:AAF53364.2,REFSEQ:NP_609693,GB_protein:AAF53364; MD5=8e02f95506a5ffc59a3c85f22fd1cfc1; length=620; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=2L:complement(13974230..13975879,13976477..13976689); ID=FBpp0080188; name=nimC1-PA; parent=FBgn0259896,FBtr0080615; dbxref=FlyBase:FBpp0080188,FlyBase_Annotation_IDs:CG8942-PA,GB_protein:AAF53364.2,REFSEQ:NP_609693,GB_protein:AAF53364; MD5=8e02f95506a5ffc59a3c85f22fd1cfc1; length=620; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] Nimrod C1 OS=Drosophila melanogaster GN=nimC1 PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta] type=protein; loc=2L:complement(13974230..13975879,13976477..13976689); ID=FBpp0080188; name=nimC1-PA; parent=FBgn0259896,FBtr0080615; dbxref=FlyBase:FBpp0080188,FlyBase_Annotation_IDs:CG8942-PA,GB_protein:AAF53364.2,REFSEQ:NP_609693,GB_protein:AAF53364,FlyMine:FBpp0080188,modMine:FBpp0080188; MD5=8e02f95506a5ffc59a3c85f22fd1cfc1; length=620; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] Nimrod C1 OS=Drosophila melanogaster GN=nimC1 PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta] type=protein; loc=2L:complement(join(13976477..13976689,13974230..13975879)); ID=FBpp0080188; name=NimC1-PA; parent=FBgn0259896,FBtr0080615; dbxref=FlyBase:FBpp0080188,FlyBase_Annotation_IDs:CG8942-PA,GB_protein:AAF53364.2,REFSEQ:NP_609693,GB_protein:AAF53364,FlyMine:FBpp0080188,modMine:FBpp0080188; MD5=8e02f95506a5ffc59a3c85f22fd1cfc1; length=620; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=2L:complement(join(13976477..13976689,13974230..13975879)); ID=FBpp0080188; name=NimC1-PA; parent=FBgn0259896,FBtr0080615; dbxref=FlyBase:FBpp0080188,FlyBase_Annotation_IDs:CG8942-PA,GB_protein:AAF53364.2,REFSEQ:NP_609693,GB_protein:AAF53364,FlyMine:FBpp0080188,modMine:FBpp0080188; MD5=8e02f95506a5ffc59a3c85f22fd1cfc1; length=620; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] Isoform of M9PBB4, Nimrod C1, isoform A OS=Drosophila melanogaster GN=NimC1 PE=4 SV=2 [DROME.fasta.20160308] FBpp0080188 type=protein; loc=2L:complement(join(13976477..13976689,13974230..13975879)); ID=FBpp0080188; name=NimC1-PA; parent=FBgn0259896,FBtr0080615; dbxref=FlyBase:FBpp0080188,FlyBase_Annotation_IDs:CG8942-PA,GB_protein:AAF53364.2,REFSEQ:NP_609693,GB_protein:AAF53364,FlyMine:FBpp0080188,modMine:FBpp0080188; MD5=8e02f95506a5ffc59a3c85f22fd1cfc1; length=620; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] [fly-122215-dmel-6-09-contam.fasta] type=protein; loc=2L:complement(join(13976477..13976689,13974230..13975879)); ID=FBpp0080188; name=NimC1-PA; parent=FBgn0259896,FBtr0080615; dbxref=FlyBase:FBpp0080188,FlyBase_Annotation_IDs:CG8942-PA,GB_protein:AAF53364.2,REFSEQ:NP_609693,GB_protein:AAF53364,UniProt/TrEMBL:Q9VJU5,FlyMine:FBpp0080188,modMine:FBpp0080188; MD5=8e02f95506a5ffc59a3c85f22fd1cfc1; length=620; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
Organism:	Drosophila melanogaster
Length:	620 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	phagocytosis [IMP] Wnt receptor signaling pathway [ISS]
Molecular Function:	Wnt-protein binding [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHIQCLWVC LGFFMLLVDF IQPIGLNVCN RSQVVTYKRY VERSRVIPYQ HRSFWSGWQT  60
   61 KYRTEYYTDE ETAYRTVMRP SCCEGYEGSV ENCKPVCRQQ CPQHGFCSSP NTCSCNAGYG 120
  121 GIDCHPVCPT VCGKNEFCDR PGVCSCQNGY KRTSPSDNCL PVCEKECGHH SFCSEPGKCE 180
  181 CEPGYEKVGN GTVFPDGYKN NSNGNCSPIC PKDCGQNSRC VRPGVCECEN GYAGDDGGTN 240
  241 CRPVCSTCPE NGLCLSPGVC VCKPGYVMRN DLCQPHCEKC SDNAHCVAPN QCECFPGYES 300
  301 SGADKKCVPK CSKGCTNGFC FAPETCVCSI GYQMGPNQVC EPKCSLNCVH GKCTSPETCT 360
  361 CDPGYRFKDN SHHECDPICD SGCSNGHCVA PNFCICHDGY QLNSTNPVTS MCQPICKGCQ 420
  421 FGDCVAPNVC ECNVGYENIN GLCELQTTTD SYEYSTTTVE LQSSTVDPQL QTSTSEVPHS 480
  481 NCTAGCMCWI EYDGMGTFNT AKCAKICVDP QDKPCLNLDN CQCDLSSGQL VCQEDSDMDY 540
  541 SGENSRYVCH ILPEQGARSE AEVRIPDRTG SSNKWMIIVG SCAGMIIGVA ATIIGIKYYR 600
  601 RSTSRRNFEA EEAIVECDFE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: nimC1-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: