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Protein Overview: FBpp0310252, TM9...

General Information:
Name(s) found: FBpp0310252 [FlyBase]
TM9SF4-PA / FBpp0080109 [FlyBase]
Description(s) found:
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  • gi|7298085|gb|AAF53324.1| CG7364 [Drosophila melanogaster] [NCBI NR]
  • gb|AAF44810.1| symbol=BG:DS00797.1; cDNA=method:''sim4'', score:''1000.0'', desc:''LD32761 LD Drosophila melanogaster embryo pOT2 Drosophila melanogaster cDNA clone, full length mRNA sequence from BDGP''; match=method:''BLASTX'', version:''2.0a19MP-WashU [NCBI NR]
  • gi|19921282|ref|NP_609669.1| CG7364 [Drosophila melanogaster] [NCBI NR]
  • gi|16182489|gb|AAL13504.1| GH02822p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0310252; name=TM9SF4-PB; parent=FBgn0028541,FBtr0343657; dbxref=FlyBase:FBpp0310252,FlyBase_Annotation_IDs:CG7364-PB; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\TM9SF4 (CG7364, FBgn0028541). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:13771087..13774310. It has the cytological map location 34D1. Based on sequence similarity, it is predicted to have molecular function</span>: transporter activity. There is experimental evidence that it is involved in the biological process</span>: phagocytosis; encapsulation of foreign target; defense response to Gram-negative bacterium; phagocytosis, engulfment. 6 alleles are reported. The phenotypes of these alleles are annotated with: sessile hemocyte; plasmatocyte. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG7364-PA translation from_gene[CG7364 BG:DS00797.1 FBgn0028541] seq_release:3 mol_weight=72538 cds_boundaries:(2L:13,753,393..13,755,632[+]) aa_length:630 transcript_info:[CG7364-RA seq_release:3] gene_info:[gene symbol:BG:DS00797.1 synonyms:[CG16861 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V3N6) BG:DS00797.1 protein (GH02822P) [DrosMelano7227.FASTAC.txt]
  • (AE003641) BG:DS00797.1 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG7364-PA [Drosophila melanogaster]gi|7287772|gb|AAF44810.1| symbol=BG:DS00797.1; cDNA=method:''sim4'', score:''1000.0'', desc:''LD32761 LD Drosophila melanogaster embryo pOT2 Drosophila melanogaster cDNA clone, full length mRNA sequence from BDGP''; mat [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0080109; name=TM9SF4-PA; parent=FBgn0028541,FBtr0080532; dbxref=FlyBase:FBpp0080109,FlyBase_Annotation_IDs [fly-100309-contam.fasta]
  • CG7364-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH02822p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0080109; name=TM9SF4-PA; parent=FBgn0028541,FBtr0080532; dbxref=FlyBase:FBpp0080109,FlyBase_Annotation_IDs:CG7364-PA,GB_protein:AAF53324.1,REFSEQ:NP_609669,GB_protein:AAF53324; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0080109; name=TM9SF4-PA; parent=FBgn0028541,FBtr0080532; dbxref=FlyBase:FBpp0080109,FlyBase_Annotation_IDs:CG7364-PA,GB_protein:AAF53324.1,REFSEQ:NP_609669,GB_protein:AAF53324; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • GH02822p OS=Drosophila melanogaster GN=TM9SF4 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0080109; name=TM9SF4-PA; parent=FBgn0028541,FBtr0080532; dbxref=FlyBase:FBpp0080109,FlyBase_Annotation_IDs:CG7364-PA,GB_protein:AAF53324.1,REFSEQ:NP_609669,GB_protein:AAF53324,FlyMine:FBpp0080109,modMine:FBpp0080109; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • GH02822p OS=Drosophila melanogaster GN=TM9SF4 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0080109; name=TM9SF4-PA; parent=FBgn0028541,FBtr0080532; dbxref=FlyBase:FBpp0080109,FlyBase_Annotation_IDs:CG7364-PA,GB_protein:AAF53324.1,REFSEQ:NP_609669,GB_protein:AAF53324,FlyMine:FBpp0080109,modMine:FBpp0080109; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0310252; name=TM9SF4-PB; parent=FBgn0028541,FBtr0343657; dbxref=GB_protein:AHN54421,REFSEQ:NP_001285907,FlyBase:FBpp0310252,FlyBase_Annotation_IDs:CG7364-PB; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0080109; name=TM9SF4-PA; parent=FBgn0028541,FBtr0080532; dbxref=FlyBase:FBpp0080109,FlyBase_Annotation_IDs:CG7364-PA,GB_protein:AAF53324.1,REFSEQ:NP_609669,GB_protein:AAF53324,FlyMine:FBpp0080109,modMine:FBpp0080109; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0310252; name=TM9SF4-PB; parent=FBgn0028541,FBtr0343657; dbxref=GB_protein:AHN54421,REFSEQ:NP_001285907,FlyBase:FBpp0310252,FlyBase_Annotation_IDs:CG7364-PB; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0080109 type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0080109; name=TM9SF4-PA; parent=FBgn0028541,FBtr0080532; dbxref=FlyBase:FBpp0080109,FlyBase_Annotation_IDs:CG7364-PA,GB_protein:AAF53324.1,REFSEQ:NP_609669,GB_protein:AAF53324,FlyMine:FBpp0080109,modMine:FBpp0080109; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0310252 type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0310252; name=TM9SF4-PB; parent=FBgn0028541,FBtr0343657; dbxref=GB_protein:AHN54421,REFSEQ:NP_001285907,FlyBase:FBpp0310252,FlyBase_Annotation_IDs:CG7364-PB; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0080109; name=TM9SF4-PA; parent=FBgn0028541,FBtr0080532; dbxref=FlyBase:FBpp0080109,FlyBase_Annotation_IDs:CG7364-PA,GB_protein:AAF53324.1,REFSEQ:NP_609669,GB_protein:AAF53324,UniProt/TrEMBL:Q9V3N6,FlyMine:FBpp0080109,modMine:FBpp0080109; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(13771241..13771246,13771337..13772571,13772641..13772868,13772933..13773116,13773184..13773322,13773383..13773483); ID=FBpp0310252; name=TM9SF4-PB; parent=FBgn0028541,FBtr0343657; dbxref=GB_protein:AHN54421,REFSEQ:NP_001285907,FlyBase:FBpp0310252,FlyBase_Annotation_IDs:CG7364-PB,UniProt/TrEMBL:Q9V3N6; MD5=fc3415f293734678937924459dda0fb9; length=630; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 630 amino acids

    Gene Ontology:
    Cellular Component: endosome [ISS]
    integral to membrane [IEA]
    Biological Process: phagocytosis, engulfment [IMP]
    defense response to Gram-negative bacterium [IMP]
    encapsulation of foreign target [IMP]
    phagocytosis [IMP]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSGALARPC LAIVLLAGVV LVADSFYVPG VAPVEFVQDQ KIDVKAVKMT SSRTQLPYQY  60
   61 YSLRFCYPKN GTLIFKSENL GEVLRGDRIV NTPYEVRMNQ QVNCRLLCNQ KDRPLTWSKE 120
  121 DSALVAERIQ HEYFVHLLVD NLPVATRIVS VNNPAEVTYE HGYRLGQVDG DNIYINNHLK 180
  181 FILSYHMHSK DKYRVVGFEV ETVSVSHKEL KFHGDTCNFP DSARPQLVNP NGETQLYFTY 240
  241 SVEWKESKVS WASRWDIYLG MRDVQIHWFS IINSLVVVFF LSGILTMIMI RTLRRDIARY 300
  301 NTDDNIEDTL EETGWKLVHG DVFRPPKNTR LFSAIIGSGI QIFFMALITI FFAMLGMLSP 360
  361 SSRGALMTSG IFMYVFMGTI AGYYAARLYK TMKGREWKRA AFLTATLYPG IVFGTGFFLN 420
  421 FFIWDKSSSG AVPFTTMISL LLLWFGISVP LVYLGFYLGY RKQPYQHPVR TNMIPRQVPT 480
  481 QHWYMNAVLS TLMAGILPFG AVFIELFFVF TAIWQNQFYY LFGFLFLVFC ILVVSCAQIS 540
  541 IVMTYFQLCG EDYRWWWRSF VVSGGSAVYV LFYSIFYFFT KLEITEFIPT LLYLGYTGLM 600
  601 VLTFWLLTGS IGFFAAYVFI LRIYGAVKID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle