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Protein Overview: giac-PA

General Information:
Name(s) found: giac-PA / FBpp0079852 [FlyBase]
Description(s) found:
Found 13 descriptions.
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  • The gene giacomo is referred to in FlyBase by the symbol Dmel\giac (CG6589, FBgn0032368). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:11610510..11611772. It has the cytological map location 32F4. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: spermatid development; sperm motility. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: microtubule basal body [IDA]
    nucleus [IDA]
    axonemal microtubule [IDA]
    Biological Process: sperm motility [IMP]
    spermatid development [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHNSRNNLG IMRLREDVDD ISHILRQQQI DSKVAQGSCK FNCLGGEPKG VGSGMCNNRD  60
   61 VSAYVDTLFK RKIGHLMDDV YNLKKQVMSA DCSSKSAQST PKPESVALAK PRINYASEEL 120
  121 GARIINVKAH SIDGTNIIRS LLGLDFSTNP PVNMIRTGLS PGSCFGFNGS RATVTLHLAR 180
  181 TIIVEAITLT HVAREMTPDL CVKSAPKNFD GLRSENSKRE LLGQWSYDNA ANKRTQSYSV 240
  241 RSDTFFRNLD FSFNSNHGAN STCIYRVEVY GRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] deduced N/A No confident structure predictions are available.
    2 View Details [107..273] FFAS03 2.24 X-ray structure of human PP25 gene product, HSPC034. Northeast Structural Genomics Target HR1958.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.849929350901 bayes_pls_golite062009
  • protein binding
    		•  0.843446597674347 bayes_pls_golite062009
  • integrin binding
    		•  0.389417870075603 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle