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Protein Overview: CG17118-PA

General Information:
Name(s) found: CG17118-PA / FBpp0079700 [FlyBase]
Description(s) found:
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  • gi|7297748|gb|AAF52999.1| CG17118 [Drosophila melanogaster] [NCBI NR]
  • gi|24583511|ref|NP_723611.1| CG17118 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17118 (CG17118, FBgn0032291). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:10730255..10731356. It has the cytological map location 32A5. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: dendrite morphogenesis. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG17118-PA translation from_gene[CG17118 CG17118 FBgn0032291] seq_release:3 mol_weight=31707 cds_boundaries:(2L:10,722,708..10,723,673[+]) aa_length:281 transcript_info:[CG17118-RA seq_release:3] gene_info:[gene symbol:CG17118 FBgn0032291 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VKR1) CG17118 protein (AT30334p) [DrosMelano7227.FASTAC.txt]
  • (AE003629) CG17118 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG17118-PA [Drosophila melanogaster]gi|24583511|ref|NP_723611.1| CG17118-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(10730299..10730382,10730440..10730631,10730698..10731267); ID=FBpp0079700; name=CG17118-PA; parent=FBgn0032291,FBtr0080111; dbxref=GB_protein:AAF52999.1,FlyBase:FBpp0079700,FlyBase_Annotation_IDs:CG17118-PA,REFSEQ:NP_723611,GB_pr [fly-100309-contam.fasta]
  • CG17118-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(10730299..10730382,10730440..10730631,10730698..10731267); ID=FBpp0079700; name=CG17118-PA; parent=FBgn0032291,FBtr0080111; dbxref=GB_protein:AAF52999.1,FlyBase:FBpp0079700,FlyBase_Annotation_IDs:CG17118-PA,REFSEQ:NP_723611,GB_protein:AAF52999; MD5=e04c18365f7b273aa13a8c00c33bb915; length=281; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(10730299..10730382,10730440..10730631,10730698..10731267); ID=FBpp0079700; name=CG17118-PA; parent=FBgn0032291,FBtr0080111; dbxref=GB_protein:AAF52999.1,FlyBase:FBpp0079700,FlyBase_Annotation_IDs:CG17118-PA,REFSEQ:NP_723611,GB_protein:AAF52999; MD5=e04c18365f7b273aa13a8c00c33bb915; length=281; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG17118 OS=Drosophila melanogaster GN=CG17118 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(10730299..10730382,10730440..10730631,10730698..10731267); ID=FBpp0079700; name=CG17118-PA; parent=FBgn0032291,FBtr0080111; dbxref=GB_protein:AAF52999.1,FlyBase:FBpp0079700,FlyBase_Annotation_IDs:CG17118-PA,REFSEQ:NP_723611,GB_protein:AAF52999,FlyMine:FBpp0079700,modMine:FBpp0079700; MD5=e04c18365f7b273aa13a8c00c33bb915; length=281; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(10730299..10730382,10730440..10730631,10730698..10731267); ID=FBpp0079700; name=CG17118-PA; parent=FBgn0032291,FBtr0080111; dbxref=GB_protein:AAF52999.1,FlyBase:FBpp0079700,FlyBase_Annotation_IDs:CG17118-PA,REFSEQ:NP_723611,GB_protein:AAF52999,FlyMine:FBpp0079700,modMine:FBpp0079700; MD5=e04c18365f7b273aa13a8c00c33bb915; length=281; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(10730299..10730382,10730440..10730631,10730698..10731267); ID=FBpp0079700; name=CG17118-PA; parent=FBgn0032291,FBtr0080111; dbxref=GB_protein:AAF52999.1,FlyBase:FBpp0079700,FlyBase_Annotation_IDs:CG17118-PA,REFSEQ:NP_723611,GB_protein:AAF52999,FlyMine:FBpp0079700,modMine:FBpp0079700; MD5=e04c18365f7b273aa13a8c00c33bb915; length=281; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9VKR2, Uncharacterized protein OS=Drosophila melanogaster GN=CG17118 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0079700 type=protein; loc=2L:join(10730299..10730382,10730440..10730631,10730698..10731267); ID=FBpp0079700; name=CG17118-PA; parent=FBgn0032291,FBtr0080111; dbxref=GB_protein:AAF52999.1,FlyBase:FBpp0079700,FlyBase_Annotation_IDs:CG17118-PA,REFSEQ:NP_723611,GB_protein:AAF52999,FlyMine:FBpp0079700,modMine:FBpp0079700; MD5=e04c18365f7b273aa13a8c00c33bb915; length=281; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(10730299..10730382,10730440..10730631,10730698..10731267); ID=FBpp0079700; name=CG17118-PA; parent=FBgn0032291,FBtr0080111; dbxref=GB_protein:AAF52999.1,FlyBase:FBpp0079700,FlyBase_Annotation_IDs:CG17118-PA,REFSEQ:NP_723611,GB_protein:AAF52999,UniProt/TrEMBL:Q9VKR1,FlyMine:FBpp0079700,modMine:FBpp0079700; MD5=e04c18365f7b273aa13a8c00c33bb915; length=281; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 281 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: dendrite morphogenesis [IMP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRAAYQKGF LTVLYSVGSS PLNNWSSYTK NGYIKRIYDE DIKSLVLEIM GSNVSTTFIH  60
   61 CPSECKEQLG IKLPFLVLLI KNMHKYFCFE VKIQDDQRFM RRFRVSNFQS KTSVKPFCTA 120
  121 MPMGMSPGWN QIQFNLADFT RRAYGSNYLE TVSLQLHANV RIRRIYFADK LYTEAELPND 180
  181 YRLMGKPKDL KKPEKQFKVQ ATARPPSPLN TGRGEPGPSK DTDAEATGPA TDPMSEPEPA 240
  241 LQKSPSPPVP QKVPSPAASA PPEPATEEPA PQTEATEEAY Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] Pfam 11.013228 No description for PF05018.4 was found. No confident structure predictions are available.
    2 View Details [78..281] FFAS03 1.02 Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle