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Protein Overview: RluA-2-PA, FBpp0...

General Information:
Name(s) found: FBpp0307932 [FlyBase]
RluA-2-PA / FBpp0079622 [FlyBase]
Description(s) found:
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  • gi|22946170|gb|AAF52961.2| RluA-2 [Drosophila melanogaster] [NCBI NR]
  • gi|19921090|ref|NP_609411.1| RluA-2 [Drosophila melanogaster] [NCBI NR]
  • gi|16198203|gb|AAL13915.1| LD40728p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0307932; name=RluA-2-PD; parent=FBgn0032256,FBtr0337002; dbxref=REFSEQ:NP_001188782,GB_protein:ADV37032,FlyBase:FBpp0307932,FlyBase_Annotation_IDs:CG6187-PD; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r5.56; species=Dmel; [FlyBase]
  • The gene RluA-2 is referred to in FlyBase by the symbol Dmel\RluA-2 (CG6187, FBgn0032256). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:10477114..10482983. It has the cytological map location 31F1. Based on sequence similarity, it is predicted to have molecular function</span>: DRAP deaminase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: pseudouridine synthesis. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG6187-PA translation from_gene[CG6187 CG6187 FBgn0032256] seq_release:3 mol_weight=62010 cds_boundaries:(2L:10,469,795..10,475,325[+]) aa_length:547 transcript_info:[CG6187-RA seq_release:3] gene_info:[gene symbol:CG6187 FBgn0032256 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VKU8) CG6187 protein (LD40728p) [DrosMelano7227.FASTAC.txt]
  • CG6187-PA [Drosophila melanogaster]gi|16198203|gb|AAL13915.1| LD40728p [Drosophila melanogaster]gi|19921090|ref|NP_609411.1| CG6187-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0079622; name=RluA-2-PA; parent=FBgn0032256,FBtr0 [fly-100309-contam.fasta]
  • CG6187-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD40728p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RluA-2 CG6187-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RluA-2 [Drosophila melanogaster] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0079622; name=RluA-2-PA; parent=FBgn0032256,FBtr0080032; dbxref=FlyBase:FBpp0079622,FlyBase_Annotation_IDs:CG6187-PA,GB_protein:AAF52961.2,REFSEQ:NP_609411,GB_protein:AAF52961; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0079622; name=RluA-2-PA; parent=FBgn0032256,FBtr0080032; dbxref=FlyBase:FBpp0079622,FlyBase_Annotation_IDs:CG6187-PA,GB_protein:AAF52961.2,REFSEQ:NP_609411,GB_protein:AAF52961; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • LD40728p OS=Drosophila melanogaster GN=RluA-2 PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0079622; name=RluA-2-PA; parent=FBgn0032256,FBtr0080032; dbxref=FlyBase:FBpp0079622,FlyBase_Annotation_IDs:CG6187-PA,GB_protein:AAF52961.2,REFSEQ:NP_609411,GB_protein:AAF52961,FlyMine:FBpp0079622,modMine:FBpp0079622; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • LD40728p OS=Drosophila melanogaster GN=RluA-2 PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0079622; name=RluA-2-PA; parent=FBgn0032256,FBtr0080032; dbxref=FlyBase:FBpp0079622,FlyBase_Annotation_IDs:CG6187-PA,GB_protein:AAF52961.2,REFSEQ:NP_609411,GB_protein:AAF52961,FlyMine:FBpp0079622,modMine:FBpp0079622; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0307932; name=RluA-2-PD; parent=FBgn0032256,FBtr0337002; dbxref=REFSEQ:NP_001188782,GB_protein:ADV37032,FlyBase:FBpp0307932,FlyBase_Annotation_IDs:CG6187-PD; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0307932; name=RluA-2-PD; parent=FBgn0032256,FBtr0337002; dbxref=REFSEQ:NP_001188782,GB_protein:ADV37032,FlyBase:FBpp0307932,FlyBase_Annotation_IDs:CG6187-PD; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0079622; name=RluA-2-PA; parent=FBgn0032256,FBtr0080032; dbxref=FlyBase:FBpp0079622,FlyBase_Annotation_IDs:CG6187-PA,GB_protein:AAF52961.2,REFSEQ:NP_609411,GB_protein:AAF52961,FlyMine:FBpp0079622,modMine:FBpp0079622; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0079622 type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0079622; name=RluA-2-PA; parent=FBgn0032256,FBtr0080032; dbxref=FlyBase:FBpp0079622,FlyBase_Annotation_IDs:CG6187-PA,GB_protein:AAF52961.2,REFSEQ:NP_609411,GB_protein:AAF52961,FlyMine:FBpp0079622,modMine:FBpp0079622; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0307932 type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0307932; name=RluA-2-PD; parent=FBgn0032256,FBtr0337002; dbxref=REFSEQ:NP_001188782,GB_protein:ADV37032,FlyBase:FBpp0307932,FlyBase_Annotation_IDs:CG6187-PD; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0079622; name=RluA-2-PA; parent=FBgn0032256,FBtr0080032; dbxref=FlyBase:FBpp0079622,FlyBase_Annotation_IDs:CG6187-PA,GB_protein:AAF52961.2,REFSEQ:NP_609411,GB_protein:AAF52961,UniProt/TrEMBL:Q9VKU8,FlyMine:FBpp0079622,modMine:FBpp0079622; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(10477386..10477592,10481098..10481284,10481348..10481570,10481622..10481709,10481763..10481983,10482043..10482233,10482285..10482574,10482625..10482786,10482845..10482919); ID=FBpp0307932; name=RluA-2-PD; parent=FBgn0032256,FBtr0337002; dbxref=REFSEQ:NP_001188782,GB_protein:ADV37032,FlyBase:FBpp0307932,FlyBase_Annotation_IDs:CG6187-PD,UniProt/TrEMBL:Q9VKU8; MD5=e38c2424d91372e2d115849922e9e30a; length=547; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pseudouridine synthesis [IEA]
    Molecular Function: RNA binding [IEA]
    DRAP deaminase activity [ISS]
    pseudouridine synthase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSKLLRNA QTQHGDASSV DVENIFLHRH MLYTNPTSDG NLHDREDSPE CVWCPDDKDG  60
   61 SPAESKDPPI SISEEKSETQ SKEVLSEKRK ASSTDDEGHV KKVKLEANSL KTKRPGFSDE 120
  121 RYDETSYYFE NGLRKVYPYF FTFTTFAKGR WVDEKILDVF VREFRAAPPE EYERSLEAGK 180
  181 LTVNSEKVPK DYKIKHNDLL ANVVHRHEVP VTSQPIKIVY MDKDIVVVNK PASIPVHPCG 240
  241 RYRHNTVVFI LAKEHNLKNL RTIHRLDRLT SGLLLFGRTA EKARELELQI RTRQVQKEYV 300
  301 CRVEGRFPDG IVECNEKIDV VSYKIGVCKV SPKGKDCKTT FKRIGEVGSD SIVLCKPLTG 360
  361 RMHQIRVHLQ FLGYPISNDP LYNHEVFGPL KGRGGDIGGI TEEQLISNLI SIHNAENWLG 420
  421 LEGDQIVSGE IKDVAASTSV VEAPSVVQAP INSETEKPVI SKNLEPSNDA TAQIATQTCY 480
  481 EEPDRSFDSK KTTSDPQCSE CKINYRDPGT KDLIMYLHAW KYKGVGWEYE TELPEWACNS 540
  541 NIDYDKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle