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Protein Overview: FBpp0310250, RpL7-PA

General Information:
Name(s) found: FBpp0310250 [FlyBase]
RpL7-PA / FBpp0079536 [FlyBase]
Description(s) found:
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  • gi|7297615|gb|AAF52868.1| ribosomal protein L7 [Drosophila melanogaster] [NCBI NR]
  • gi|24583248|ref|NP_523531.1| ribosomal protein L7 [Drosophila melanogaster] [NCBI NR]
  • gi|19528543|gb|AAL90386.1| RH04903p [Drosophila melanogaster] [NCBI NR]
  • gi|13124809|sp|P32100.2|RL7_DROME RecName: Full=60S ribosomal protein L7 [NCBI NR]
  • 60S ribosomal protein L7 OS=Drosophila melanogaster GN=RpL7 PE=1 SV=2 [Swiss-Prot]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0310250; name=RpL7-PB; parent=FBgn0005593,FBtr0343653; dbxref=FlyBase:FBpp0310250,FlyBase_Annotation_IDs:CG4897-PB; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ribosomal protein L7 is referred to in FlyBase by the symbol Dmel\RpL7 (CG4897, FBgn0005593). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:10201101..10202145. It has the cytological map location 31B1. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4897-PA translation from_gene[CG4897 RpL7 FBgn0005593] seq_release:3 mol_weight=29552 cds_boundaries:(2L:10,193,639..10,194,464[+]) aa_length:252 transcript_info:[CG4897-RA seq_release:3] gene_info:[gene symbol:RpL7 FBgn0005593 gene_boundaries:(2L:1 [hmr_yeast5_DM3-1_pombe.fasta]
  • (P32100) 60S ribosomal protein L7 [DrosMelano7227.FASTAC.txt]
  • (AE003627) RpL7 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4897-PA [Drosophila melanogaster]gi|19528543|gb|AAL90386.1| RH04903p [Drosophila melanogaster]gi|24583248|ref|NP_523531.1| CG4897-PA [Drosophila melanogaster]gi|13124809|sp|P32100|RL7_DROME 60S ribosomal protein L7 [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0079536; name=RpL7-PA; parent=FBgn0005593,FBtr0079946; dbxref=FlyBase:FBpp0079536,FlyBase_Annotation_IDs:CG4897-PA,GB_protein:AAF52868.1,REFSEQ:NP_523531,GB_protein:AAF52868; MD5=6c1 [fly-100309-contam.fasta]
  • 60S ribosomal protein L7 [nr-271106-contam.fasta]
  • RH04903p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG4897-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Ribosomal protein L7 CG4897-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0079536; name=RpL7-PA; parent=FBgn0005593,FBtr0079946; dbxref=FlyBase:FBpp0079536,FlyBase_Annotation_IDs:CG4897-PA,GB_protein:AAF52868.1,REFSEQ:NP_523531,GB_protein:AAF52868; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0079536; name=RpL7-PA; parent=FBgn0005593,FBtr0079946; dbxref=FlyBase:FBpp0079536,FlyBase_Annotation_IDs:CG4897-PA,GB_protein:AAF52868.1,REFSEQ:NP_523531,GB_protein:AAF52868; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • 60S ribosomal protein L7 OS=Drosophila melanogaster GN=RpL7 PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0079536; name=RpL7-PA; parent=FBgn0005593,FBtr0079946; dbxref=FlyBase:FBpp0079536,FlyBase_Annotation_IDs:CG4897-PA,GB_protein:AAF52868.1,REFSEQ:NP_523531,GB_protein:AAF52868,FlyMine:FBpp0079536,modMine:FBpp0079536; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0079536; name=RpL7-PA; parent=FBgn0005593,FBtr0079946; dbxref=FlyBase:FBpp0079536,FlyBase_Annotation_IDs:CG4897-PA,GB_protein:AAF52868.1,REFSEQ:NP_523531,GB_protein:AAF52868,FlyMine:FBpp0079536,modMine:FBpp0079536; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0310250; name=RpL7-PB; parent=FBgn0005593,FBtr0343653; dbxref=GB_protein:AHN54308,REFSEQ:NP_001285794,FlyBase:FBpp0310250,FlyBase_Annotation_IDs:CG4897-PB; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0079536; name=RpL7-PA; parent=FBgn0005593,FBtr0079946; dbxref=FlyBase:FBpp0079536,FlyBase_Annotation_IDs:CG4897-PA,GB_protein:AAF52868.1,REFSEQ:NP_523531,GB_protein:AAF52868,FlyMine:FBpp0079536,modMine:FBpp0079536; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0310250; name=RpL7-PB; parent=FBgn0005593,FBtr0343653; dbxref=GB_protein:AHN54308,REFSEQ:NP_001285794,FlyBase:FBpp0310250,FlyBase_Annotation_IDs:CG4897-PB; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P32100, Ribosomal protein L7, isoform B OS=Drosophila melanogaster GN=RpL7 PE=3 SV=1 [DROME.fasta.20160308]
  • FBpp0079536 type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0079536; name=RpL7-PA; parent=FBgn0005593,FBtr0079946; dbxref=FlyBase:FBpp0079536,FlyBase_Annotation_IDs:CG4897-PA,GB_protein:AAF52868.1,REFSEQ:NP_523531,GB_protein:AAF52868,FlyMine:FBpp0079536,modMine:FBpp0079536; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0310250 type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0310250; name=RpL7-PB; parent=FBgn0005593,FBtr0343653; dbxref=GB_protein:AHN54308,REFSEQ:NP_001285794,FlyBase:FBpp0310250,FlyBase_Annotation_IDs:CG4897-PB; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0079536; name=RpL7-PA; parent=FBgn0005593,FBtr0079946; dbxref=FlyBase:FBpp0079536,FlyBase_Annotation_IDs:CG4897-PA,GB_protein:AAF52868.1,REFSEQ:NP_523531,GB_protein:AAF52868,UniProt/Swiss-Prot:P32100,FlyMine:FBpp0079536,modMine:FBpp0079536; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(10201230..10201528,10201599..10202058); ID=FBpp0310250; name=RpL7-PB; parent=FBgn0005593,FBtr0343653; dbxref=GB_protein:AHN54308,REFSEQ:NP_001285794,FlyBase:FBpp0310250,FlyBase_Annotation_IDs:CG4897-PB,UniProt/Swiss-Prot:P32100; MD5=6c173242113a02c4d9003f2e5857d863; length=252; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: cytosolic large ribosomal subunit [ISS]
    ribosome [NAS]
    Biological Process: mitotic spindle elongation [IMP]
    mitotic spindle organization [IMP]
    translation [ISS][NAS]
    Molecular Function: structural constituent of ribosome [ISS][NAS]
    transcription regulator activity [IEA]
    mRNA binding [NAS]
    rRNA binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAPVVKKPA AKKLPAVPES KLKFSKKQIS KRVAESKRRL KKAAVIALRK KENLVRAEKY  60
   61 QNEYIKAEQR EIKLRRLAKK RNQFYVPAEA KLAFVVRIRG INKVAPKVRK VLQLFRLRQI 120
  121 NNGVFIKLNK ATINMLRIAE PYITWGYPNL KSVRELIYKR GFVKHNRQRV PITDNFVIER 180
  181 KLRQAHQIQC VEDLVHEIFT VGPNFKYASN FLWPFKLNTP TGGWRKKANH YVNGGDFGNR 240
  241 EDQINRLLRK MV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] Pfam 22.677781 No description for PF08079.3 was found. Confident ab initio structure predictions are available.
    2 View Details [88..252] PSI-BLAST 60.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle