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Protein Overview: CG13089-PA

General Information:
Name(s) found: CG13089-PA / FBpp0079294 [FlyBase]
Description(s) found:
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  • gi|7297430|gb|AAF52689.1| CG13089 [Drosophila melanogaster] [NCBI NR]
  • gi|19920956|ref|NP_609238.1| CG13089 [Drosophila melanogaster] [NCBI NR]
  • gi|16198177|gb|AAL13897.1| LD37974p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13089 (CG13089, FBgn0032052). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:8515098..8516756. It has the cytological map location 29D4. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: GPI anchor biosynthetic process. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG13089-PA translation from_gene[CG13089 CG13089 FBgn0032052] seq_release:3 mol_weight=48727 cds_boundaries:(2L:8,507,384..8,508,843[+]) aa_length:426 transcript_info:[CG13089-RA seq_release:3] gene_info:[gene symbol:CG13089 FBgn0032052 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VLK0) CG13089 protein (LD37974P) [DrosMelano7227.FASTAC.txt]
  • (AE003621) CG13089 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13089-PA [Drosophila melanogaster]gi|16198177|gb|AAL13897.1| LD37974p [Drosophila melanogaster]gi|19920956|ref|NP_609238.1| CG13089-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(8515153..8515282,8515343..8515967,8516030..8516301,8516362..8516615); ID=FBpp0079294; name=CG13089-PA; parent=FBgn0032052,FBtr0079682; dbxref=FlyBase:FBpp0079294,FlyBase_Annotation_IDs:CG13089-PA,GB_protein:AAF52689.1,REFSEQ:NP_6 [fly-100309-contam.fasta]
  • LD37974p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG13089-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(8515153..8515282,8515343..8515967,8516030..8516301,8516362..8516615); ID=FBpp0079294; name=CG13089-PA; parent=FBgn0032052,FBtr0079682; dbxref=FlyBase:FBpp0079294,FlyBase_Annotation_IDs:CG13089-PA,GB_protein:AAF52689.1,REFSEQ:NP_609238,GB_protein:AAF52689; MD5=3c92febfb844f2e6139b3be75b2af062; length=426; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(8515153..8515282,8515343..8515967,8516030..8516301,8516362..8516615); ID=FBpp0079294; name=CG13089-PA; parent=FBgn0032052,FBtr0079682; dbxref=FlyBase:FBpp0079294,FlyBase_Annotation_IDs:CG13089-PA,GB_protein:AAF52689.1,REFSEQ:NP_609238,GB_protein:AAF52689; MD5=3c92febfb844f2e6139b3be75b2af062; length=426; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG13089 OS=Drosophila melanogaster GN=CG13089 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(8515153..8515282,8515343..8515967,8516030..8516301,8516362..8516615); ID=FBpp0079294; name=CG13089-PA; parent=FBgn0032052,FBtr0079682; dbxref=FlyBase:FBpp0079294,FlyBase_Annotation_IDs:CG13089-PA,GB_protein:AAF52689.1,REFSEQ:NP_609238,GB_protein:AAF52689,FlyMine:FBpp0079294,modMine:FBpp0079294; MD5=3c92febfb844f2e6139b3be75b2af062; length=426; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(8515153..8515282,8515343..8515967,8516030..8516301,8516362..8516615); ID=FBpp0079294; name=PIG-U-PA; parent=FBgn0032052,FBtr0079682; dbxref=FlyBase:FBpp0079294,FlyBase_Annotation_IDs:CG13089-PA,GB_protein:AAF52689.1,REFSEQ:NP_609238,GB_protein:AAF52689,FlyMine:FBpp0079294,modMine:FBpp0079294; MD5=3c92febfb844f2e6139b3be75b2af062; length=426; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(8515153..8515282,8515343..8515967,8516030..8516301,8516362..8516615); ID=FBpp0079294; name=PIG-U-PA; parent=FBgn0032052,FBtr0079682; dbxref=FlyBase:FBpp0079294,FlyBase_Annotation_IDs:CG13089-PA,GB_protein:AAF52689.1,REFSEQ:NP_609238,GB_protein:AAF52689,FlyMine:FBpp0079294,modMine:FBpp0079294; MD5=3c92febfb844f2e6139b3be75b2af062; length=426; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • LD37974p OS=Drosophila melanogaster GN=PIG-U PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0079294 type=protein; loc=2L:join(8515153..8515282,8515343..8515967,8516030..8516301,8516362..8516615); ID=FBpp0079294; name=PIG-U-PA; parent=FBgn0032052,FBtr0079682; dbxref=FlyBase:FBpp0079294,FlyBase_Annotation_IDs:CG13089-PA,GB_protein:AAF52689.1,REFSEQ:NP_609238,GB_protein:AAF52689,FlyMine:FBpp0079294,modMine:FBpp0079294; MD5=3c92febfb844f2e6139b3be75b2af062; length=426; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(8515153..8515282,8515343..8515967,8516030..8516301,8516362..8516615); ID=FBpp0079294; name=PIG-U-PA; parent=FBgn0032052,FBtr0079682; dbxref=FlyBase:FBpp0079294,FlyBase_Annotation_IDs:CG13089-PA,GB_protein:AAF52689.1,REFSEQ:NP_609238,GB_protein:AAF52689,UniProt/TrEMBL:Q9VLK0,FlyMine:FBpp0079294,modMine:FBpp0079294; MD5=3c92febfb844f2e6139b3be75b2af062; length=426; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 426 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [IEA]
    integral to membrane [IEA]
    Biological Process: GPI anchor biosynthetic process [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKFFKLLL LGGAVRFYFC RTPLAPMIGN RVEFATPLNS HKRMQEGIFL LQSGIDPYLG  60
   61 DLVHESPLIL SALSGLFQKY PQFLPIFYII LDICTAALLY AMSLRFVKQK QDQQDKERKE 120
  121 YAKDTEELQF GPLDKLDIPE LVIVAYLFSP LTVMSCIGMT STVISNLFLA FFFYCLVKGM 180
  181 LIPCLLVLAF ETVRSFYPIV LIAPLLLVFS RNSVRRGVAI AALFIVSCLI VAVANYFVLN 240
  241 SWNFLDGTLG FIFYFRDLQP NIGLFWYFFT EMFEHFRTMF LITFQLNATV LYLVPLSIKL 300
  301 RKEPLLLATV LVALMAVFRA YPSLGDVGFY LALLPLWKRC WKFMAHGFVV FTFFLVTLSM 360
  361 MGALWHLWIY AGSANANFYF GATLAFSTGQ IFLITDLLFA HVKREFCLFN GQKILIDGEE 420
  421 ARIVLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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