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Protein Overview: CG5958-PA

General Information:
Name(s) found: CG5958-PA / FBpp0079090 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5958 (CG5958, FBgn0031913). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:7430529..7433480. It has the cytological map location 27F4. Based on sequence similarity, it is predicted to have molecular function</span>: retinal binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transport. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    Biological Process: transport [IEA]
    Molecular Function: retinal binding [ISS]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATDIAEEA FHLRLGYLKP ETVEIARVEL RETEEVKAEA IIKLRELLKA TPELNYKDDD  60
   61 AFLTVFLRAC HFYPEGALEK MKTTASFRKE YASLVRGLLV EQVKEKFVKG SVINVLKNCD 120
  121 QKGRRVLIVN CGKLWDPSDI TSDEMFRMLY MVHLAAQLEE ETQVRGVVCI MDFEGLSMKQ 180
  181 VKALSPSFSK RLLTFIQEAM PLRMKEVHFV KQPFIFNMVW SLFKPFVKQK LNNRMHFHGS 240
  241 DMKSLQKFLD PSVLPANYKG TLPAIDYGGV EWFPALEQQA QYVEEWSQLG PAQW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..294] PSI-BLAST 53.30103 The Molecular Basis of Vitamin E Retention: Structure of Human Alpha-Tocopherol Transfer Protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle