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Protein Overview: CG5171-PB, CG517...

General Information:
Name(s) found: FBpp0311455 [FlyBase]
FBpp0306865 [FlyBase]
CG5171-PA / FBpp0079068 [FlyBase]
CG5171-PB / FBpp0079067 [FlyBase]
Description(s) found:
Found 49 descriptions.
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  • type=protein; loc=2L:join(7403297..7403361,7403542..7404163,7404230..7404364); ID=FBpp0311455; name=CG5171-PF; parent=FBgn0031907,FBtr0345288; dbxref=FlyBase:FBpp0311455,FlyBase_Annotation_IDs:CG5171-PF; MD5=c5ada1159a829c6df187f6ca9131b76c; length=273; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2L:join(7403297..7403361,7403542..7404163,7404230..7404364); ID=FBpp0306865; name=CG5171-PE; parent=FBgn0031907,FBtr0334838; dbxref=FlyBase:FBpp0306865,FlyBase_Annotation_IDs:CG5171-PE,REFSEQ:NP_001137806,GB_protein:ACL83012; MD5=c5ada1159a829c6df187f6ca9131b76c; length=273; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5171 (CG5171, FBgn0031907). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:7395832..7404526. It has the cytological map location 27F3. Based on sequence similarity, it is predicted to have molecular function</span>: trehalose-phosphatase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: trehalose biosynthetic process. 3 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5171 (CG5171, FBgn0031907). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:7395832..7404526. It has the cytological map location 27F3. Based on sequence similarity, it is predicted to have molecular function</span>: trehalose-phosphatase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: trehalose biosynthetic process. 3 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: trehalose biosynthetic process [IEA]
    Molecular Function: trehalose-phosphatase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEKQVAPVI SNLEDFANNL PGYLISESPV AVLLDYDGTL APIADNPAKT KMPVELEAIL  60
   61 HKIAKHPKVF LAVISGRGLK DVQKQVNIDG ITYAGNHGLE IEYPDGSRHD YELPTEIQKN 120
  121 YTQMVRELKE KVEKNGAWVE DKKVSLTYHY RDTPAALKDQ QKQLASEICT KFGFRANQAH 180
  181 EAIEAKPPVN WNKGEAAVYI LKQKFGDNWS QKVSVVFAGD DTTDEDAMRV LRGLGRSFRI 240
  241 SADAQIQTYA DFRLPKQAVM TDLLKWIANV YVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 31.522879 Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.92340854382984 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle