Description(s) found:
SHOW ONLY BEST
|
gi|24582294|ref|NP_523495.2| thrombospondin, isoform A [Drosophila melanogaster]
[NCBI NR]
gi|22945791|gb|AAF52425.2| thrombospondin, isoform A [Drosophila melanogaster]
[NCBI NR]
gi|221473235|ref|NP_001137802.1| thrombospondin, isoform F [Drosophila melanogaster]
[NCBI NR]
gi|220901969|gb|ACL83008.1| thrombospondin, isoform F [Drosophila melanogaster]
[NCBI NR]
The gene Thrombospondin is referred to in FlyBase by the symbol Dmel\Tsp (CG11326, FBgn0031850). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:6686786..6709085. It has the cytological map location 26F7-27A1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: calcium ion binding. There is experimental evidence that it is involved in the biological process</span>: muscle organ development; cell adhesion mediated by integrin; muscle attachment. 14 alleles are reported. The phenotypes of these alleles are annotated with: tendon cell; dorsal oblique muscle; lateral longitudinal muscle; dorsal acute muscle; embryonic/larval muscle system; ventral longitudinal muscle. It has 6 annotated transcripts and 6 annotated polypeptides.
[FlyBase]
>CG11326-PA translation from_gene[CG11326 Tsp FBgn0031850] seq_release:3 mol_weight=118254 cds_boundaries:(2L:6,679,144..6,694,050[-]) aa_length:1060 transcript_info:[CG11326-RA seq_release:3] gene_info:[gene symbol:Tsp FBgn0031850 gene_boundaries:(2L:
[hmr_yeast5_DM3-1_pombe.fasta]
(Q9VM97) CG11326 protein
[DrosMelano7227.FASTAC.txt]
CG11326-PA, isoform A [Drosophila melanogaster]gi|24582294|ref|NP_523495.2| CG11326-PA [Drosophila melanogaster]
[nrdb_11152004_Chlamydomonas]
type=protein; loc=2L:complement(6686925..6686995,6687064..6687197,6687254..6688737,6688796..6689118,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078941; n
[fly-100309-contam.fasta]
type=protein; loc=2L:complement(6686925..6686995,6687064..6687197,6687254..6688737,6688796..6689118,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0112980; n
[fly-100309-contam.fasta]
Thrombospondin CG11326-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG11326-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=2L:complement(6686925..6686995,6687064..6687197,6687254..6688737,6688796..6689118,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078941; name=Tsp-PA; parent=FBgn0031850,FBtr0079312; dbxref=FlyBase:FBpp0078941,FlyBase_Annotation_IDs:CG11326-PA,GB_protein:AAF52425.2,REFSEQ:NP_523495,GB_protein:AAF52425; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=2L:complement(6686925..6686995,6687064..6687197,6687254..6688737,6688796..6689118,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0112980; name=Tsp-PF; parent=FBgn0031850,FBtr0114488; dbxref=FlyBase_Annotation_IDs:CG11326-PF,FlyBase:FBpp0112980,REFSEQ:NP_001137802,GB_protein:ACL83008; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=2L:complement(6686925..6686995,6687064..6687197,6687254..6688737,6688796..6689118,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078941; name=Tsp-PA; parent=FBgn0031850,FBtr0079312; dbxref=FlyBase:FBpp0078941,FlyBase_Annotation_IDs:CG11326-PA,GB_protein:AAF52425.2,REFSEQ:NP_523495,GB_protein:AAF52425; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=2L:complement(6686925..6686995,6687064..6687197,6687254..6688737,6688796..6689118,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0112980; name=Tsp-PF; parent=FBgn0031850,FBtr0114488; dbxref=FlyBase_Annotation_IDs:CG11326-PF,FlyBase:FBpp0112980,REFSEQ:NP_001137802,GB_protein:ACL83008; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
Thrombospondin, isoform A OS=Drosophila melanogaster GN=Tsp PE=2 SV=2
[UniProt_drosophila_07-01-2011_reversed.fasta]
type=protein; loc=2L:complement(6686925..6686995,6687064..6687197,6687254..6688737,6688796..6689118,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078941; name=Tsp-PA; parent=FBgn0031850,FBtr0079312; dbxref=FlyBase:FBpp0078941,FlyBase_Annotation_IDs:CG11326-PA,GB_protein:AAF52425.2,REFSEQ:NP_523495,GB_protein:AAF52425,FlyMine:FBpp0078941,modMine:FBpp0078941; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=2L:complement(6686925..6686995,6687064..6687197,6687254..6688737,6688796..6689118,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0112980; name=Tsp-PF; parent=FBgn0031850,FBtr0114488; dbxref=FlyBase_Annotation_IDs:CG11326-PF,FlyBase:FBpp0112980,REFSEQ:NP_001137802,GB_protein:ACL83008; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6688796..6689118,6687254..6688737,6687064..6687197,6686925..6686995)); ID=FBpp0078941; name=Tsp-PA; parent=FBgn0031850,FBtr0079312; dbxref=FlyBase:FBpp0078941,FlyBase_Annotation_IDs:CG11326-PA,GB_protein:AAF52425.2,REFSEQ:NP_523495,GB_protein:AAF52425,FlyMine:FBpp0078941,modMine:FBpp0078941; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6688796..6689118,6687254..6688737,6687064..6687197,6686925..6686995)); ID=FBpp0112980; name=Tsp-PF; parent=FBgn0031850,FBtr0114488; dbxref=FlyBase_Annotation_IDs:CG11326-PF,FlyBase:FBpp0112980,REFSEQ:NP_001137802,GB_protein:ACL83008; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6688796..6689118,6687254..6688737,6687064..6687197,6686925..6686995)); ID=FBpp0112980; name=Tsp-PF; parent=FBgn0031850,FBtr0114488; dbxref=FlyBase_Annotation_IDs:CG11326-PF,FlyBase:FBpp0112980,REFSEQ:NP_001137802,GB_protein:ACL83008; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6688796..6689118,6687254..6688737,6687064..6687197,6686925..6686995)); ID=FBpp0078941; name=Tsp-PA; parent=FBgn0031850,FBtr0079312; dbxref=FlyBase:FBpp0078941,FlyBase_Annotation_IDs:CG11326-PA,GB_protein:AAF52425.2,REFSEQ:NP_523495,GB_protein:AAF52425,FlyMine:FBpp0078941,modMine:FBpp0078941; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
Thrombospondin, isoform A OS=Drosophila melanogaster GN=Tsp PE=1 SV=2
[DROME.fasta.20160308]
FBpp0078941 type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6688796..6689118,6687254..6688737,6687064..6687197,6686925..6686995)); ID=FBpp0078941; name=Tsp-PA; parent=FBgn0031850,FBtr0079312; dbxref=FlyBase:FBpp0078941,FlyBase_Annotation_IDs:CG11326-PA,GB_protein:AAF52425.2,REFSEQ:NP_523495,GB_protein:AAF52425,FlyMine:FBpp0078941,modMine:FBpp0078941; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0112980 type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6688796..6689118,6687254..6688737,6687064..6687197,6686925..6686995)); ID=FBpp0112980; name=Tsp-PF; parent=FBgn0031850,FBtr0114488; dbxref=FlyBase_Annotation_IDs:CG11326-PF,FlyBase:FBpp0112980,REFSEQ:NP_001137802,GB_protein:ACL83008; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6688796..6689118,6687254..6688737,6687064..6687197,6686925..6686995)); ID=FBpp0078941; name=Tsp-PA; parent=FBgn0031850,FBtr0079312; dbxref=FlyBase:FBpp0078941,FlyBase_Annotation_IDs:CG11326-PA,GB_protein:AAF52425.2,REFSEQ:NP_523495,GB_protein:AAF52425,UniProt/TrEMBL:Q9VM97,FlyMine:FBpp0078941,modMine:FBpp0078941; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6688796..6689118,6687254..6688737,6687064..6687197,6686925..6686995)); ID=FBpp0112980; name=Tsp-PF; parent=FBgn0031850,FBtr0114488; dbxref=FlyBase_Annotation_IDs:CG11326-PF,FlyBase:FBpp0112980,REFSEQ:NP_001137802,GB_protein:ACL83008,UniProt/TrEMBL:Q9VM97; MD5=bd9273bdc61bbbaceece020d97293053; length=1060; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
|