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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Tsp-PA, Tsp-PF
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWTRVLLIG LTALALTFVD VASLSLDPVA SAELEQFIRK GDVVISTRHI RPRRKLHISI  60
   61 EALFMIDFPM LKHKMSFFLD RKQQRVTLDI SANGATESRN FEIPNINETS TIRSLALQFS 120
  121 KNRITLHVDC KASTHHDIDM NLAKLYTQMD DPVIKLFRER KYPLHFDGDM EHSLQRANCQ 180
  181 KGNHRRGNRR MLRNKITERE KNKKRDVRGW YEPTIAREGV VDHRHQEVPT DVERGDIPVL 240
  241 NGDCEDALAR SLSDLLALVK LLREDVAHQR QEIAYLRMLL ENCAGCKNPL TTDNQLRIEP 300
  301 DCRSANPCYP GVECLDSAAG PRCGHCPLGF IGDGKSCKPG VTCAHHMCYP GVQCHDTVNG 360
  361 AQCDSCPAGY EGDGRTCSLR NPCLDTPCPS GAQCLQVGYP PYFHCISCPM GHEVNGTSCR 420
  421 DMNECLLYDP CDELATCTNL SPGFQCSPCP VGFDGTHAHG YFADYYSVDY RRQTCLDVDE 480
  481 CRTGFFRCPE HSTCINEIGS YRCQCHEGYV TNGTYSCLDR SSVFMCPDGT VCDRNAVCLR 540
  541 MDNIRHKCHC NVGWAGNGLI CGRDTDVDGW PDQAIGCPEL RCQRDNCPKL PNSGQEDADL 600
  601 DGHGDGCDDD ADGDNVQNSQ DNCWLAYNTE QLDSDGDKVG DVCDNCVLKY NPRQLDTDED 660
  661 GLGDECDGDI DNDSIPNALD NCPLLPNPSQ SDVDNDGVGD ACDNCPNLPN PDQKDRDMDF 720
  721 VGDACHRDID GDDDGVPNSL DNCPMVSNSD QLDTDGDGTG DECDDDMDGD GIPNYKDNCP 780
  781 LAKNPKQDDF NRNGKGDSCE DDEDVDGVPN GMDNCPNNSM IHHTDFRTLQ TIPLDPKGLS 840
  841 QADPNWVVHA NGTEIVQTLN SDPGLAVGKD AFGGVDFDGT FYINDDTDDD YAGFVFSYQS 900
  901 SYKYYVVQWK KGTQTYWEPR PFTASAAPGI QIKLVNSTEG PGPMMRNSLW HEGNTDGEAR 960
  961 LLWKDPKNIA WKERTSYRWS LVHRPAIGLI RLQMHEGNRL IFDSGNVFDS TLKGGRLGVF1020
 1021 CFSQRMIIWS NLQYKCNNRV KPLIYNDLSD YLKTKVELQD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle