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Protein Overview: ifc-PA

General Information:
Name(s) found: ifc-PA / FBpp0078810 [FlyBase]
Description(s) found:
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  • gi|7297049|gb|AAF52318.1| infertile crescent [Drosophila melanogaster] [NCBI NR]
  • gi|20147522|gb|AAM12535.1|AF466379_1 sphingolipid delta 4 desaturase protein DES-1 [Drosophila melanogaster] [NCBI NR]
  • gi|17136246|ref|NP_476594.1| infertile crescent [Drosophila melanogaster] [NCBI NR]
  • gi|16769050|gb|AAL28744.1| LD15458p [Drosophila melanogaster] [NCBI NR]
  • gi|1667359|emb|CAA63889.1| Des-1 protein [Drosophila melanogaster] [NCBI NR]
  • The gene infertile crescent is referred to in FlyBase by the symbol Dmel\ifc (CG9078, FBgn0001941). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:5986324..5988858. It has the cytological map location 26B2. There is experimental evidence that it has the molecular function</span>: sphingolipid delta-4 desaturase activity. There is experimental evidence that it is involved in the biological process</span>: spermatogenesis. 30 alleles are reported. The phenotypes of these alleles are annotated with: spermatid; testis; spindle; spermatocyte; meiotic cell cycle; aster. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG9078-PA translation from_gene[CG9078 ifc FBgn0001941] seq_release:3 mol_weight=37214 cds_boundaries:(2L:5,978,710..5,980,395[+]) aa_length:321 transcript_info:[CG9078-RA seq_release:3] gene_info:[gene symbol:ifc FBgn0001941 gene_boundaries:(2L:5,978 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q94515) IFC protein (LD15458P) (Sphingolipid delta 4 desaturase protein DES-1) [DrosMelano7227.FASTAC.txt]
  • (AE003612) ifc gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG9078-PA [Drosophila melanogaster]gi|20147522|gb|AAM12535.1| sphingolipid delta 4 desaturase protein DES-1 [Drosophila melanogaster]gi|16769050|gb|AAL28744.1| LD15458p [Drosophila melanogaster]gi|17136246|ref|NP_476594.1| CG9078-PA [Drosophila melanog [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(5986495..5986892,5987616..5988183); ID=FBpp0078810; name=ifc-PA; parent=FBgn0001941,FBtr0079179; dbxref=FlyBase:FBpp0078810,FlyBase_Annotation_IDs:CG9078-PA,GB_protein:AAF52318.1,REFSEQ:NP_476594,GB_protein:AAF52318; MD5=d1b93102 [fly-100309-contam.fasta]
  • sphingolipid delta 4 desaturase protein DES-1 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Des-1 protein [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG9078-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD15458p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • infertile crescent CG9078-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • infertile crescent [Drosophila melanogaster] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • type=protein; loc=2L:join(5986495..5986892,5987616..5988183); ID=FBpp0078810; name=ifc-PA; parent=FBgn0001941,FBtr0079179; dbxref=FlyBase:FBpp0078810,FlyBase_Annotation_IDs:CG9078-PA,GB_protein:AAF52318.1,REFSEQ:NP_476594,GB_protein:AAF52318; MD5=d1b931025699bb5b2ef17d12c141887d; length=321; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(5986495..5986892,5987616..5988183); ID=FBpp0078810; name=ifc-PA; parent=FBgn0001941,FBtr0079179; dbxref=FlyBase:FBpp0078810,FlyBase_Annotation_IDs:CG9078-PA,GB_protein:AAF52318.1,REFSEQ:NP_476594,GB_protein:AAF52318; MD5=d1b931025699bb5b2ef17d12c141887d; length=321; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Des-1 protein OS=Drosophila melanogaster GN=ifc PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(5986495..5986892,5987616..5988183); ID=FBpp0078810; name=ifc-PA; parent=FBgn0001941,FBtr0079179; dbxref=FlyBase:FBpp0078810,FlyBase_Annotation_IDs:CG9078-PA,GB_protein:AAF52318.1,REFSEQ:NP_476594,GB_protein:AAF52318,FlyMine:FBpp0078810,modMine:FBpp0078810; MD5=d1b931025699bb5b2ef17d12c141887d; length=321; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(5986495..5986892,5987616..5988183); ID=FBpp0078810; name=ifc-PA; parent=FBgn0001941,FBtr0079179; dbxref=FlyBase:FBpp0078810,FlyBase_Annotation_IDs:CG9078-PA,GB_protein:AAF52318.1,REFSEQ:NP_476594,GB_protein:AAF52318,FlyMine:FBpp0078810,modMine:FBpp0078810; MD5=d1b931025699bb5b2ef17d12c141887d; length=321; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(5986495..5986892,5987616..5988183); ID=FBpp0078810; name=ifc-PA; parent=FBgn0001941,FBtr0079179; dbxref=FlyBase:FBpp0078810,FlyBase_Annotation_IDs:CG9078-PA,GB_protein:AAF52318.1,REFSEQ:NP_476594,GB_protein:AAF52318,FlyMine:FBpp0078810,modMine:FBpp0078810; MD5=d1b931025699bb5b2ef17d12c141887d; length=321; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Des-1 protein OS=Drosophila melanogaster GN=ifc PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0078810 type=protein; loc=2L:join(5986495..5986892,5987616..5988183); ID=FBpp0078810; name=ifc-PA; parent=FBgn0001941,FBtr0079179; dbxref=FlyBase:FBpp0078810,FlyBase_Annotation_IDs:CG9078-PA,GB_protein:AAF52318.1,REFSEQ:NP_476594,GB_protein:AAF52318,FlyMine:FBpp0078810,modMine:FBpp0078810; MD5=d1b931025699bb5b2ef17d12c141887d; length=321; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(5986495..5986892,5987616..5988183); ID=FBpp0078810; name=ifc-PA; parent=FBgn0001941,FBtr0079179; dbxref=FlyBase:FBpp0078810,FlyBase_Annotation_IDs:CG9078-PA,GB_protein:AAF52318.1,REFSEQ:NP_476594,GB_protein:AAF52318,UniProt/TrEMBL:Q94515,FlyMine:FBpp0078810,modMine:FBpp0078810; MD5=d1b931025699bb5b2ef17d12c141887d; length=321; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [TAS]
    integral to membrane [IEA]
    plasma membrane [ISS][NAS]
    Biological Process: spermatogenesis [IMP][TAS]
    oxidation reduction [IEA]
    fatty acid biosynthetic process [IEA]
    Molecular Function: stearoyl-CoA 9-desaturase activity [ISS]
    sphingolipid delta-4 desaturase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQKVSRTDF EWVYTEEPHA SRRKIILEKY PQIKKLFGHD PNFKWVAGAM VLTQILALFV  60
   61 VKDLSWSWLI VAAYCFGGII NHSLMLAVHE ISHNLAFGHS RPMHNRILGF ICNLPIGLPM 120
  121 SISFKKYHLE HHRYQGDEAI DTDIPTLLEA RLFDTTFGKF LWVCLQPFFY IFRPLIINPK 180
  181 PPTRLEIINT VVQLTFNALI VYFLGWKPLA YLLIGSILAM GLHPVAGHFI SEHYMFAKGF 240
  241 ETYSYYGPLN WITFNVGYHN EHHDFPAVPG SRLPEVKRIA KEFYDTMPQH TSWTRVLYDF 300
  301 IMDPAVGPYA RVKRRQRGLA S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle