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Protein Overview: cl-PA, FBpp03030...

General Information:
Name(s) found: FBpp0303003 [FlyBase]
FBpp0303002 [FlyBase]
cl-PA / FBpp0078728 [FlyBase]
Description(s) found:
Found 40 descriptions.
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  • type=protein; loc=2L:join(5520401..5520545,5520619..5520700,5521136..5521289); ID=FBpp0303003; name=cl-PC; parent=FBgn0000318,FBtr0329968; dbxref=FlyBase:FBpp0303003,FlyBase_Annotation_IDs:CG11024-PC,REFSEQ:NP_001260099,GB_protein:AGB92635; MD5=ff79c8845ed082aa795859d8677a7a40; length=126; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2L:join(5520401..5520545,5520619..5520700,5521136..5521289); ID=FBpp0303002; name=cl-PB; parent=FBgn0000318,FBtr0329967; dbxref=FlyBase:FBpp0303002,FlyBase_Annotation_IDs:CG11024-PB,REFSEQ:NP_001260098,GB_protein:AGB92634; MD5=ff79c8845ed082aa795859d8677a7a40; length=126; release=r5.56; species=Dmel; [FlyBase]
  • The gene clot is referred to in FlyBase by the symbol Dmel\cl (CG11024, FBgn0000318). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:5520258..5521384. It has the cytological map location 25E5. It is reported to have molecular function</span>: disulfide oxidoreductase activity. There is experimental evidence that it is involved in the biological process</span>: eye pigment biosynthetic process. 17 alleles are reported. The phenotypes of these alleles are annotated with: Malpighian tubule; pigment cell. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 126 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: eye pigment biosynthetic process [IMP]
    Molecular Function: disulfide oxidoreductase activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVTHNVKGY DEFTKKMEEL ENGDEPVHVL FSGGKDEKGE SWCPYCVKAE PVIHDALKKA  60
   61 PGNSHFVHVD VGERAYWKDL NCPFRKDPNT HLIFLPTLLR WKRPQRLDGE RCSNQDLVEM 120
  121 MFEDED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] PSI-BLAST 30.0 Crystal Structure of human Trp14

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • binding
    		•  0.618139748326926 bayes_pls_golite062009
  • protein-disulfide reductase activity
    		•  0.570446901634881 bayes_pls_golite062009
  • protein binding
    		•  0.134341907247724 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle