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Protein Overview: cype-PA, FBpp029...

General Information:
Name(s) found: FBpp0297878 [FlyBase]
FBpp0297877 [FlyBase]
cype-PA / FBpp0078707 [FlyBase]
Description(s) found:
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  • gi|24581914|ref|NP_536787.1| cyclope [Drosophila melanogaster] [NCBI NR]
  • gi|22945660|gb|AAF52241.3| cyclope [Drosophila melanogaster] [NCBI NR]
  • gi|14581466|gb|AAK32965.1| cytochrome c oxidase subunit VIc [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297878; name=cype-PC; parent=FBgn0015031,FBtr0307035; dbxref=REFSEQ:NP_001245886,GB_protein:AFH03561,FlyBase:FBpp0297878,FlyBase_Annotation_IDs:CG14028-PC; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297877; name=cype-PB; parent=FBgn0015031,FBtr0307034; dbxref=REFSEQ:NP_001245885,GB_protein:AFH03560,FlyBase:FBpp0297877,FlyBase_Annotation_IDs:CG14028-PB; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r5.56; species=Dmel; [FlyBase]
  • The gene cyclope is referred to in FlyBase by the symbol Dmel\cype (CG14028, FBgn0015031). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:5327241..5328000. It has the cytological map location 25D6. Based on sequence similarity, it is predicted to have molecular function</span>: cytochrome-c oxidase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: mitochondrial electron transport, cytochrome c to oxygen. 18 alleles are reported. The phenotypes of these alleles are annotated with: embryonic/first instar larval cuticle; leg; eye; embryonic head; adult thorax; wing; tergite; ommatidium; denticle belt. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG14028-PA translation from_gene[CG14028 cype FBgn0015031] seq_release:3 mol_weight=8296 cds_boundaries:(2L:5,320,078..5,320,375[+]) aa_length:77 transcript_info:[CG14028-RA seq_release:3] gene_info:[gene symbol:cype synonyms:[CG18323] FBgn0015031 gen [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VMS1) CG14028 protein (Cytochrome c oxidase subunit VIc) [DrosMelano7227.FASTAC.txt]
  • CG14028-PA [Drosophila melanogaster]gi|14581466|gb|AAK32965.1| cytochrome c oxidase subunit VIc [Drosophila melanogaster]gi|24581914|ref|NP_536787.1| CG14028-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0078707; name=cype-PA; parent=FBgn0015031,FBtr0079072; dbxref=FlyBase:FBpp0078707,FlyBase_Annotation_IDs:CG14028-PA,GB_protein:AAF52241.3,REFSEQ:NP_536787,GB_protein:AAF52241; MD5=72f3dc [fly-100309-contam.fasta]
  • cyclope CG14028-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG14028-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • cytochrome c oxidase subunit VIc [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0078707; name=cype-PA; parent=FBgn0015031,FBtr0079072; dbxref=FlyBase:FBpp0078707,FlyBase_Annotation_IDs:CG14028-PA,GB_protein:AAF52241.3,REFSEQ:NP_536787,GB_protein:AAF52241; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0078707; name=cype-PA; parent=FBgn0015031,FBtr0079072; dbxref=FlyBase:FBpp0078707,FlyBase_Annotation_IDs:CG14028-PA,GB_protein:AAF52241.3,REFSEQ:NP_536787,GB_protein:AAF52241; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Cyclope OS=Drosophila melanogaster GN=cype PE=1 SV=3 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0078707; name=cype-PA; parent=FBgn0015031,FBtr0079072; dbxref=FlyBase:FBpp0078707,FlyBase_Annotation_IDs:CG14028-PA,GB_protein:AAF52241.3,REFSEQ:NP_536787,GB_protein:AAF52241,FlyMine:FBpp0078707,modMine:FBpp0078707; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297877; name=cype-PB; parent=FBgn0015031,FBtr0307034; dbxref=REFSEQ:NP_001245885,GB_protein:AFH03560,FlyBase:FBpp0297877,FlyBase_Annotation_IDs:CG14028-PB; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297878; name=cype-PC; parent=FBgn0015031,FBtr0307035; dbxref=REFSEQ:NP_001245886,GB_protein:AFH03561,FlyBase:FBpp0297878,FlyBase_Annotation_IDs:CG14028-PC; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Cyclope OS=Drosophila melanogaster GN=cype PE=2 SV=3 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0078707; name=cype-PA; parent=FBgn0015031,FBtr0079072; dbxref=FlyBase:FBpp0078707,FlyBase_Annotation_IDs:CG14028-PA,GB_protein:AAF52241.3,REFSEQ:NP_536787,GB_protein:AAF52241,FlyMine:FBpp0078707,modMine:FBpp0078707; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297877; name=cype-PB; parent=FBgn0015031,FBtr0307034; dbxref=REFSEQ:NP_001245885,GB_protein:AFH03560,FlyBase:FBpp0297877,FlyBase_Annotation_IDs:CG14028-PB; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297878; name=cype-PC; parent=FBgn0015031,FBtr0307035; dbxref=REFSEQ:NP_001245886,GB_protein:AFH03561,FlyBase:FBpp0297878,FlyBase_Annotation_IDs:CG14028-PC; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0078707; name=cype-PA; parent=FBgn0015031,FBtr0079072; dbxref=FlyBase:FBpp0078707,FlyBase_Annotation_IDs:CG14028-PA,GB_protein:AAF52241.3,REFSEQ:NP_536787,GB_protein:AAF52241,FlyMine:FBpp0078707,modMine:FBpp0078707; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297877; name=cype-PB; parent=FBgn0015031,FBtr0307034; dbxref=REFSEQ:NP_001245885,GB_protein:AFH03560,FlyBase:FBpp0297877,FlyBase_Annotation_IDs:CG14028-PB; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297878; name=cype-PC; parent=FBgn0015031,FBtr0307035; dbxref=REFSEQ:NP_001245886,GB_protein:AFH03561,FlyBase:FBpp0297878,FlyBase_Annotation_IDs:CG14028-PC; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Cyclope, isoform A OS=Drosophila melanogaster GN=cype PE=1 SV=3 [DROME.fasta.20160308]
  • FBpp0078707 type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0078707; name=cype-PA; parent=FBgn0015031,FBtr0079072; dbxref=FlyBase:FBpp0078707,FlyBase_Annotation_IDs:CG14028-PA,GB_protein:AAF52241.3,REFSEQ:NP_536787,GB_protein:AAF52241,FlyMine:FBpp0078707,modMine:FBpp0078707; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0297877 type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297877; name=cype-PB; parent=FBgn0015031,FBtr0307034; dbxref=REFSEQ:NP_001245885,GB_protein:AFH03560,FlyBase:FBpp0297877,FlyBase_Annotation_IDs:CG14028-PB; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0297878 type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297878; name=cype-PC; parent=FBgn0015031,FBtr0307035; dbxref=REFSEQ:NP_001245886,GB_protein:AFH03561,FlyBase:FBpp0297878,FlyBase_Annotation_IDs:CG14028-PC; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0078707; name=cype-PA; parent=FBgn0015031,FBtr0079072; dbxref=FlyBase:FBpp0078707,FlyBase_Annotation_IDs:CG14028-PA,GB_protein:AAF52241.3,REFSEQ:NP_536787,GB_protein:AAF52241,UniProt/TrEMBL:Q9VMS1,FlyMine:FBpp0078707,modMine:FBpp0078707; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297877; name=cype-PB; parent=FBgn0015031,FBtr0307034; dbxref=REFSEQ:NP_001245885,GB_protein:AFH03560,FlyBase:FBpp0297877,FlyBase_Annotation_IDs:CG14028-PB,UniProt/TrEMBL:Q9VMS1; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(5327507..5327676,5327744..5327807); ID=FBpp0297878; name=cype-PC; parent=FBgn0015031,FBtr0307035; dbxref=REFSEQ:NP_001245886,GB_protein:AFH03561,FlyBase:FBpp0297878,FlyBase_Annotation_IDs:CG14028-PC,UniProt/TrEMBL:Q9VMS1; MD5=72f3dcb8155a208d51d90373e7f504f3; length=77; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 77 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    mitochondrial respiratory chain complex IV [ISS]
    Biological Process: mitochondrial electron transport, cytochrome c to oxygen [ISS]
    Molecular Function: cytochrome-c oxidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTPATSSA GPVLRGLHNA TIKRNLAVSL GLTAVVTIAY KILVNDPKKA AYADFYSKYD  60
   61 ANKSFERMKA AGRFQSC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.49

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle