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Protein Overview: CG17652-PA, FBpp...

General Information:
Name(s) found: FBpp0305723 [FlyBase]
CG17652-PA / FBpp0077570 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=2L:complement(1731403..1731816,1731880..1732080,1732144..1732263); ID=FBpp0305723; name=CG17652-PB; parent=FBgn0031361,FBtr0333543; dbxref=REFSEQ:NP_001259881,GB_protein:AGB92418,FlyBase:FBpp0305723,FlyBase_Annotation_IDs:CG17652-PB; MD5=68eae121deb0f83af7d902090900506b; length=244; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17652 (CG17652, FBgn0031361). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:1731358..1732356. It has the cytological map location 22B1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phagocytosis, engulfment [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISRFKKSH KTLVFFASNF DYREPYQVLI DATFCQAALQ QKIGIDEQIK KYFQCGVKLL  60
   61 TTQCVILESE SLGAPLTGAT SIVKRFHVHK CGHEGKPVPA SECIKSMTKD NRYVVASQDR 120
  121 LLQESLRKIP GRCLLYLHKA TPVLEAPSKA SKKWVQRRAK NLMLGKQVEK IDYMKEKQGL 180
  181 KPAETAVKPK KHKGPKNPNP LSCKKSKKDK AKQQLKGVEQ TAITKAKRKR VKIPAHVKAA 240
  241 LGKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] PSI-BLAST 17.69897 Hypothetical protein AF0591
    2 View Details [182..244] MSA 1.034997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.35566910325969 bayes_pls_golite062009
  • catalytic activity
    		•  1.20318488753881 bayes_pls_golite062009
  • binding
    		•  0.580830628591659 bayes_pls_golite062009
  • nuclease activity
    		•  0.499094721194363 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.351108315345473 bayes_pls_golite062009
  • exonuclease activity
    		•  0.111351996464558 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle