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Protein Overview: Pph13-PA

General Information:
Name(s) found: Pph13-PA / FBpp0077730 [FlyBase]
Description(s) found:
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  • gi|94400518|gb|ABF17900.1| FI01102p [Drosophila melanogaster] [NCBI NR]
  • gi|7296182|gb|AAF51474.1| PvuII-PstI homology 13 [Drosophila melanogaster] [NCBI NR]
  • gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster] [NCBI NR]
  • gi|17137502|ref|NP_477330.1| PvuII-PstI homology 13 [Drosophila melanogaster] [NCBI NR]
  • The gene PvuII-PstI homology 13 is referred to in FlyBase by the symbol Dmel\Pph13 (CG2819, FBgn0023489). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:577488..579549. It has the cytological map location 21E2. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: rhabdomere development. 4 alleles are reported. The phenotypes of these alleles are annotated with: rhabdomere; retina; subrhabdomeral cisterna. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG2819-PA translation from_gene[CG2819 Pph13 FBgn0023489] seq_release:3 mol_weight=39335 cds_boundaries:(2L:579,658..580,912[+]) aa_length:357 transcript_info:[CG2819-RA seq_release:3] gene_info:[gene symbol:Pph13 FBgn0023489 gene_boundaries:(2L:579,1 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9XZU0) PPH13 protein [DrosMelano7227.FASTAC.txt]
  • (AE003589) Pph13 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG2819-PA [Drosophila melanogaster]gi|17137502|ref|NP_477330.1| CG2819-PA [Drosophila melanogaster]gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(577993..578033,578155..578420,578484..579250); ID=FBpp0077730; name=Pph13-PA; parent=FBgn0023489,FBtr0078070; dbxref=FlyBase:FBpp0077730,FlyBase_Annotation_IDs:CG2819-PA,GB_protein:AAF51474.1,REFSEQ:NP_477330,GB_protein:AAF51474; [fly-100309-contam.fasta]
  • Munster protein [Drosophila melanogaster] [nr-271106-contam.fasta]
  • FI01102p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG2819-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • PvuII-PstI homology 13 CG2819-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(577993..578033,578155..578420,578484..579250); ID=FBpp0077730; name=Pph13-PA; parent=FBgn0023489,FBtr0078070; dbxref=FlyBase:FBpp0077730,FlyBase_Annotation_IDs:CG2819-PA,GB_protein:AAF51474.1,REFSEQ:NP_477330,GB_protein:AAF51474; MD5=7027dde4f9d3a14270905d190cebdbef; length=357; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(577993..578033,578155..578420,578484..579250); ID=FBpp0077730; name=Pph13-PA; parent=FBgn0023489,FBtr0078070; dbxref=FlyBase:FBpp0077730,FlyBase_Annotation_IDs:CG2819-PA,GB_protein:AAF51474.1,REFSEQ:NP_477330,GB_protein:AAF51474; MD5=7027dde4f9d3a14270905d190cebdbef; length=357; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • FI01102p OS=Drosophila melanogaster GN=Pph13 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(577993..578033,578155..578420,578484..579250); ID=FBpp0077730; name=Pph13-PA; parent=FBgn0023489,FBtr0078070; dbxref=FlyBase:FBpp0077730,FlyBase_Annotation_IDs:CG2819-PA,GB_protein:AAF51474.1,REFSEQ:NP_477330,GB_protein:AAF51474,FlyMine:FBpp0077730,modMine:FBpp0077730; MD5=7027dde4f9d3a14270905d190cebdbef; length=357; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(577993..578033,578155..578420,578484..579250); ID=FBpp0077730; name=Pph13-PA; parent=FBgn0023489,FBtr0078070; dbxref=FlyBase:FBpp0077730,FlyBase_Annotation_IDs:CG2819-PA,GB_protein:AAF51474.1,REFSEQ:NP_477330,GB_protein:AAF51474,FlyMine:FBpp0077730,modMine:FBpp0077730; MD5=7027dde4f9d3a14270905d190cebdbef; length=357; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(577993..578033,578155..578420,578484..579250); ID=FBpp0077730; name=Pph13-PA; parent=FBgn0023489,FBtr0078070; dbxref=FlyBase:FBpp0077730,FlyBase_Annotation_IDs:CG2819-PA,GB_protein:AAF51474.1,REFSEQ:NP_477330,GB_protein:AAF51474,FlyMine:FBpp0077730,modMine:FBpp0077730; MD5=7027dde4f9d3a14270905d190cebdbef; length=357; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0077730 type=protein; loc=2L:join(577993..578033,578155..578420,578484..579250); ID=FBpp0077730; name=Pph13-PA; parent=FBgn0023489,FBtr0078070; dbxref=FlyBase:FBpp0077730,FlyBase_Annotation_IDs:CG2819-PA,GB_protein:AAF51474.1,REFSEQ:NP_477330,GB_protein:AAF51474,FlyMine:FBpp0077730,modMine:FBpp0077730; MD5=7027dde4f9d3a14270905d190cebdbef; length=357; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(577993..578033,578155..578420,578484..579250); ID=FBpp0077730; name=Pph13-PA; parent=FBgn0023489,FBtr0078070; dbxref=FlyBase:FBpp0077730,FlyBase_Annotation_IDs:CG2819-PA,GB_protein:AAF51474.1,REFSEQ:NP_477330,GB_protein:AAF51474,UniProt/TrEMBL:Q9XZU0,FlyMine:FBpp0077730,modMine:FBpp0077730; MD5=7027dde4f9d3a14270905d190cebdbef; length=357; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: rhabdomere development [IMP]
    regulation of transcription, DNA-dependent [IEA]
    regulation of transcription [IEA][ISS]
    Molecular Function: transcription factor activity [ISS]
    RNA polymerase II transcription factor activity [NAS]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKGTMKRKQ RRYRTTFNTL QLQELERAFQ RTHYPDVFFR EELAVRIDLT EARVQVWFQN  60
   61 RRAKWRKQEK IGGLGGDYKE GALDLDVSYD DSAVLGQLDS ALGGGGTLLP DTPPQSSNSL 120
  121 DNELKASYGT GAMSPSRLSP NIFLNLNIDH LGLERGGSGL SMEWSTYPPQ TQAQTHPQMD 180
  181 SDNQLQQHPP QQHASDPIHA GSSSHHQQQQ QQHQQEQHNP QLHPGLEFAA SLSLDMTDGS 240
  241 SAYDEMKFLS VDVDQFTIDS FKADCILSME QSQMQAYGGH SQLVGSSNEL CLDGIGMSSF 300
  301 GMEEGEPKSP PSLLVLDKSL PSLSIGVEGI ADLVEQLHHH QHEGGPVGGG VITGDVM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle