YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0307924, Rpp...

General Information:
Name(s) found: FBpp0307924 [FlyBase]
Rpp30-PA / FBpp0077802 [FlyBase]
Description(s) found:
Found 27 descriptions.
SHOW ALL
  • type=protein; loc=2L:complement(251194..251464,251527..251801,251856..251924,251979..252166,252227..252317); ID=FBpp0307924; name=Rpp30-PB; parent=FBgn0022246,FBtr0336990; dbxref=REFSEQ:NP_001259808,GB_protein:AGB92345,FlyBase:FBpp0307924,FlyBase_Annotation_IDs:CG11606-PB; MD5=6a1176ca3f6ec858d96696b88d52e6c0; length=297; release=r5.56; species=Dmel; [FlyBase]
  • The gene RNaseP protein p30 is referred to in FlyBase by the symbol Dmel\Rpp30 (CG11606, FBgn0022246). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:251163..252331. It has the cytological map location 21B5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: ribonuclease activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: tRNA processing. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: ribonuclease P complex [ISS]
    Biological Process: tRNA processing [IEA][ISS]
    Molecular Function: ribonuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQTRPFYDF SIPYNKDDSV LRALLNELVE TGYKTVAIDQ SFDHSKKDPG KRGSEMFPEP  60
   61 HKIEHLRKEF QDKLRILQRI TILYVDVNVA HAMSVSHNLR KFNLIAGQPK TDAALTHCCT 120
  121 AFNGDLITFD PVAGSRLLVN RKAYQVAVRR GMFFEIKYAP SICDSNNRKD MIKIAQNYCT 180
  181 KGKSKNVIFS SGAAHEFQLR GPYDVANLAF IFGLSEDQGK NAVDGHCREL FLKAEARRLG 240
  241 KTIMFLKGNG PIIYSDSSED EKSTEDEMKG LKPQIGKADA FEVKDGTEHA IKRLKVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 16.154902 Hypothetical protein YcdX


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle