Protein Overview: ABEC1_RAT

General Information:
Name(s) found:	ABEC1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|6978519\|ref\|NP_037039.1\| apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 [Rattus norvegicus] [NCBI NR] gi\|585813\|sp\|P38483.1\|ABEC1_RAT RecName: Full=C->U-editing enzyme APOBEC-1; AltName: Full=Apolipoprotein B mRNA-editing enzyme 1 [NCBI NR] gi\|55154087\|gb\|AAH85335.1\| Apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 [Rattus norvegicus] [NCBI NR] gi\|347165\|gb\|AAA17394.1\| apolipoprotein B mRNA editing protein [NCBI NR] pir\|\|I59577 apolipoprotein B mRNA editing enzyme, catalytic chain 1 (EC 3.5.4.-) - rat [NCBI NR] gi\|149049533\|gb\|EDM01987.1\| apolipoprotein B editing complex 1, isoform CRA_a [Rattus norvegicus] [NCBI NR] gi\|149049532\|gb\|EDM01986.1\| apolipoprotein B editing complex 1, isoform CRA_a [Rattus norvegicus] [NCBI NR] (P38483) Apolipoprotein B mRNA editing enzyme (EC 3.5.4.-) (APOBEC-1) (REPR) [Swiss-Prot] C->U-editing enzyme APOBEC-1 OS=Rattus norvegicus GN=Apobec1 PE=1 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):4-164735604 Apolipoprotein B mRNA editing enzyme [hmr_yeast5_DM3-1_pombe.fasta] apolipoprotein B editing complex 1; Apolipoprotein B editing protein [HMR_022704-rand.fasta] Apolipoprotein B editing complex 1 [Rattus norvegicus]gi\|6978519\|ref\|NP_037039.1\| apolipoprotein B editing complex 1 [Rattus norvegicus]gi\|585813\|sp\|P38483\|ABME_RAT Apolipoprotein B mRNA editing enzyme (APOBEC-1) (REPR)gi\|2143597\|pir\|\|I59577 apolipopro [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Apolipoprotein B mRNA-editing enzyme [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 Apolipoprotein B mRNA editing enzyme [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta] (NM_012907) apolipoprotein B editing protein [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] C->U-editing enzyme APOBEC-1 (Apolipoprotein B mRNA-editing enzyme 1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] apolipoprotein B editing complex 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] apolipoprotein B editing complex 1, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Apolipoprotein B editing complex 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] apolipoprotein B mRNA editing protein [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 APOLIPOPROTEIN B MRNA EDITING ENZYME [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Apobec1 C->U-editing enzyme APOBEC-1 [rat-ipi-250309-contam.fasta] C->U-editing enzyme APOBEC-1 OS=Rattus norvegicus GN=Apobec1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	229 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA][NAS] cytoplasm [IDA]
Biological Process:	response to zinc ion [IEP] response to osmotic stress [IDA] mRNA processing [IEA] lipoprotein metabolic process [UNKNOWN] lipoprotein biosynthetic process [UNKNOWN][IEA] regulation of cell proliferation [UNKNOWN][IEA] lipoprotein transport [UNKNOWN][IEA] cellular response to insulin stimulus [IEP] response to ethanol [IDA] cytidine metabolic process [IC] response to drug [IDA] response to calcium ion [IDA] mRNA stabilization [UNKNOWN][IEA] defense response to virus [IDA] response to gamma radiation [UNKNOWN][IEA] cytidine to uridine editing [UNKNOWN][IDA] mRNA modification [UNKNOWN][IDA]
Molecular Function:	AU-rich element binding [UNKNOWN][IEA] zinc ion binding [IEA] RNA binding [NAS] protein binding [IPI] metal ion binding [IEA] cytidine deaminase activity [IDA][NAS] hydrolase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSETGPVAV DPTLRRRIEP HEFEVFFDPR ELRKETCLLY EINWGGRHSI WRHTSQNTNK  60
   61 HVEVNFIEKF TTERYFCPNT RCSITWFLSW SPCGECSRAI TEFLSRYPHV TLFIYIARLY 120
  121 HHADPRNRQG LRDLISSGVT IQIMTEQESG YCWRNFVNYS PSNEAHWPRY PHLWVRLYVL 180
  181 ELYCIILGLP PCLNILRRKQ PQLTFFTIAL QSCHYQRLPP HILWATGLK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.59

Protein Overview: ABEC1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: