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Protein Overview: ABEC1_RAT

General Information:
Name(s) found: ABEC1_RAT [Swiss-Prot]
Description(s) found:
Found 24 descriptions.
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  • C->U-editing enzyme APOBEC-1 OS=Rattus norvegicus GN=Apobec1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 229 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][NAS]
    cytoplasm [IDA]
    Biological Process: response to zinc ion [IEP]
    response to osmotic stress [IDA]
    mRNA processing [IEA]
    lipoprotein metabolic process [UNKNOWN]
    lipoprotein biosynthetic process [UNKNOWN][IEA]
    regulation of cell proliferation [UNKNOWN][IEA]
    lipoprotein transport [UNKNOWN][IEA]
    cellular response to insulin stimulus [IEP]
    response to ethanol [IDA]
    cytidine metabolic process [IC]
    response to drug [IDA]
    response to calcium ion [IDA]
    mRNA stabilization [UNKNOWN][IEA]
    defense response to virus [IDA]
    response to gamma radiation [UNKNOWN][IEA]
    cytidine to uridine editing [UNKNOWN][IDA]
    mRNA modification [UNKNOWN][IDA]
    Molecular Function: AU-rich element binding [UNKNOWN][IEA]
    zinc ion binding [IEA]
    RNA binding [NAS]
    protein binding [IPI]
    metal ion binding [IEA]
    cytidine deaminase activity [IDA][NAS]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSETGPVAV DPTLRRRIEP HEFEVFFDPR ELRKETCLLY EINWGGRHSI WRHTSQNTNK  60
   61 HVEVNFIEKF TTERYFCPNT RCSITWFLSW SPCGECSRAI TEFLSRYPHV TLFIYIARLY 120
  121 HHADPRNRQG LRDLISSGVT IQIMTEQESG YCWRNFVNYS PSNEAHWPRY PHLWVRLYVL 180
  181 ELYCIILGLP PCLNILRRKQ PQLTFFTIAL QSCHYQRLPP HILWATGLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle