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Protein Overview: S100B_RAT

General Information:
Name(s) found: S100B_RAT [Swiss-Prot]
Description(s) found:
Found 45 descriptions.
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  • Protein S100-B OS=Rattus norvegicus GN=S100b PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 92 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][IEA]
    perinuclear region of cytoplasm [UNKNOWN]
    cytoplasm [UNKNOWN][ISS]
    ruffle [UNKNOWN]
    neuronal cell body [UNKNOWN][IEA]
    Biological Process: regulation of neuronal synaptic plasticity [UNKNOWN][IEA]
    positive regulation of I-kappaB kinase/NF-kappaB cascade [UNKNOWN]
    memory [UNKNOWN][IEA]
    learning or memory [ISS]
    Molecular Function: S100 beta binding [UNKNOWN]
    zinc ion binding [ISS]
    identical protein binding [UNKNOWN]
    protein binding [UNKNOWN][IPI]
    protein homodimerization activity [UNKNOWN]
    calcium ion binding [IEA]
    tau protein binding [ISS]
    calcium-dependent protein binding [UNKNOWN]
    receptor binding [IPI]
    RAGE receptor binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELEKAMVA LIDVFHQYSG REGDKHKLKK SELKELINNE LSHFLEEIKE QEVVDKVMET  60
   61 LDEDGDGECD FQEFMAFVSM VTTACHEFFE HE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] PSI-BLAST 20.221849 Calcyclin (S100)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle