Protein Overview: SEM4F_RAT

General Information:
Name(s) found:	SEM4F_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|9507083\|ref\|NP_062145.1\| sema domain, immunoglobulin domain (Ig), TM domain, and short cy [Rattus norvegicus] [NCBI NR] gi\|8134688\|sp\|Q9Z143.1\|SEM4F_RAT RecName: Full=Semaphorin-4F; AltName: Full=Semaphorin-W; Short=Sema W; Flags: Precursor [NCBI NR] gi\|4519427\|dbj\|BAA75629.1\| semaphorin W [Rattus norvegicus] [NCBI NR] gi\|149036483\|gb\|EDL91101.1\| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F [Rattus norvegicus] [NCBI NR] (Q9Z143) Semaphorin 4F precursor (Semaphorin W) (Sema W) [Swiss-Prot] Semaphorin-4F OS=Rattus norvegicus GN=Sema4f PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):4-120661891;4-120661891 Semaphorin 4F precursor [hmr_yeast5_DM3-1_pombe.fasta] sema domain, immunoglobulin domain (Ig), TM domain, and short cy; sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain; Sema W; sema domain immunoglobulin domain (Ig) TM domain and short cytoplasmic domain [HMR_022704-rand.fasta] sema domain, immunoglobulin domain (Ig), TM domain, and short cy [Rattus norvegicus]gi\|4519427\|dbj\|BAA75629.1\| semaphorin W [Rattus norvegicus]gi\|8134688\|sp\|Q9Z143\|SM4F_RAT Semaphorin 4F precursor (Semaphorin W) (Sema W) [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Semaphorin-4F precursor [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_019272) sema domain, immunoglobulin domain (Ig), TM domain, and short cy; sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Tax_Id=10116 Semaphorin 4F precursor [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta] Semaphorin-4F precursor (Semaphorin-W) (Sema W) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] sema domain, immunoglobulin domain (Ig), TM domain, and short cy [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] semaphorin W [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 SEMAPHORIN 4F PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Semaphorin-4F precursor (Semaphorin W) (Sema W) [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Sema4f Semaphorin-4F [rat-ipi-250309-contam.fasta] Semaphorin-4F OS=Rattus norvegicus GN=Sema4f [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	776 amino acids
Gene Ontology:
Cellular Component:	synaptosome [IDA] postsynaptic membrane [IDA] integral to membrane [IDA] endoplasmic reticulum [UNKNOWN][IEA] synapse [IDA] plasma membrane [UNKNOWN][IEA] integral to membrane of membrane fraction [IDA]
Biological Process:	retinal ganglion cell axon guidance [IDA] multicellular organismal development [IEA] negative regulation of axon extension [IDA] nervous system development [IEA] cell differentiation [IEA] axon guidance [IDA]
Molecular Function:	protein binding [UNKNOWN][IEA] receptor activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLARAERPRP GPRPPPVFPF PPPLSLLLLL AILSAPVCGR VPRSVPRTSL PISEADSYLT  60
   61 RFAASHTYNY SALLVDPASH TLYVGARDSI FALTLPFSGE RPRRIDWMVP ETHRQNCRKK 120
  121 GKKEDECHNF IQILAIVNAS HLLTCGTFAF DPKCGVIDVS SFQQVERLES GRGKCPFEPA 180
  181 QRSAAVMAGG VLYTATVKNF LGTEPIISRA VGRAEDWIRT ETLSSWLNAP AFVAAMVLSP 240
  241 AEWGDEDGDD EIFFFFTETS RVLDSYERIK VPRVARVCAG DLGGRKTLQQ RWTTFLKADL 300
  301 LCPGPEHGRA SGVLQAMAEL RPQPGAGTPI FYGIFSSQWE GAAISAVCAF RPQDIRAVLN 360
  361 GPFRELKHDC NRGLPVMDNE VPQPRPGECI ANNMKLQQFG SSLSLPDRVL TFIRDHPLMD 420
  421 RPVFPADGRP LLVTTDTAYL RVVAHRVTSL SGKEYDVLYL GTEDGHLHRA VRIGAQLSVL 480
  481 EDLALFPEPQ PVESMKLYHD WLLVGSHTEV TQVNTSNCGR LQSCSECILA QDPVCAWSFR 540
  541 LDACVAHAGE HRGMVQDIES ADVSSLCPKE PGEHPVVFEV PVATVGHVVL PCSPSSAWAS 600
  601 CVWHQPSGVT ALTPRRDGLE VVVTPGAMGA YACECQEGGA ARVVAAYSLV WGSQRGPSNR 660
  661 AHTVVGAGLV GFLLGVLAAS LTLLLIGRRQ QRRRQRELLA RDKVGLDLGA PPSGTTSYSQ 720
  721 DPPSPSPEDE RLPLALGKRG SGFGGFPPPF LLDSCPSPAH IRLTGAPLAT CDETSI

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: SEM4F_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: