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Protein Overview: gi|14718600

General Information:
Name(s) found: gi|14718600 [NCBI NR]
Description(s) found:
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  • gi|14718600|gb|AAK72961.1|AF370011_1 voltage-gated calcium channel pore forming subunit CaV1.3alpha1 I-II loop splice variant [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):None Voltage-gated calcium channel pore forming subunit CaV1.3alpha1 I-II loop splice variant [hmr_yeast5_DM3-1_pombe.fasta]
  • voltage-gated calcium channel pore forming subunit CaV1.3alpha1 I-II loop splice variant [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Voltage-gated calcium channel pore forming subunit CaV1.3alpha1 I-II loop splice variant (Fragment) [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Voltage-gated calcium channel pore forming subunit CaV1.3alpha1 I-II loop splice variant [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta]
  • Tax_Id=10116 VOLTAGE-GATED CALCIUM CHANNEL PORE FORMING SUBUNIT CAV1.3ALPHA1 I-II LOOP SPLICE VARIANT [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Cacna1d Voltage-gated calcium channel pore forming subunit CaV1.3alpha1 I-II loop splice variant (Fragment) [rat-ipi-250309-contam.fasta]
  • Voltage-gated calcium channel pore forming subunit CaV1.3alpha1 I-II loop splice variant (Fragment) OS=Rattus norvegicus GN=Cacna1d [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 116 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    voltage-gated calcium channel complex [UNKNOWN][IEA][TAS]
    integral to membrane [IEA]
    plasma membrane [UNKNOWN]
    apical plasma membrane [IDA]
    Biological Process: sensory perception of sound [UNKNOWN]
    ion transport [IEA]
    transmembrane transport [IEA]
    calcium ion transport [UNKNOWN][IEA]
    G-protein signaling, coupled to cAMP nucleotide second messenger [UNKNOWN]
    calcium-mediated signaling [IDA]
    memory [IEP]
    Molecular Function: ion channel activity [IEA]
    protein binding [UNKNOWN]
    high voltage-gated calcium channel activity [UNKNOWN]
    dihydropyridine-sensitive calcium channel activity [UNKNOWN]
    voltage-gated calcium channel activity [UNKNOWN][IDA][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFSKEREKAK ARGDFQKLRE KQQLEEDLKG YLDWITQAED IDPENEEEGG EEGKRNTSMP  60
   61 TSETESVNTE NVSGEGETQG CCGSLCQAIS KSKLSRRWRR WNRFNRRRCR AAVKSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle