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Protein Overview: EMC3_RAT

General Information:
Name(s) found: EMC3_RAT [Swiss-Prot]
Description(s) found:
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  • gi|71153386|sp|Q5U2V8.3|TM111_RAT RecName: Full=Transmembrane protein 111 [NCBI NR]
  • gi|56605786|ref|NP_001008356.1| transmembrane protein 111 [Rattus norvegicus] [NCBI NR]
  • gi|55250426|gb|AAH85846.1| Transmembrane protein 111 [Rattus norvegicus] [NCBI NR]
  • ref|XP_232272.2| similar to RIKEN cDNA 0610039A15 [Rattus norvegicus] [NCBI NR]
  • gi|149036928|gb|EDL91546.1| transmembrane protein 111 [Rattus norvegicus] [NCBI NR]
  • Transmembrane protein 111 OS=Rattus norvegicus GN=Tmem111 PE=2 SV=3 [Swiss-Prot]
  • ER membrane protein complex subunit 3 OS=Rattus norvegicus GN=Emc3 PE=2 SV=3 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):4-154703048 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to RIKEN cDNA 0610039A15 [HMR_022704-rand.fasta]
  • similar to RIKEN cDNA 0610039A15 [Rattus norvegicus]gi|55250426|gb|AAH85846.1| Unknown (protein for MGC:94540) [Rattus norvegicus]gi|28827824|ref|NP_780310.1| RIKEN cDNA 0610039A15 [Mus musculus]gi|13435530|gb|AAH04641.1| RIKEN cDNA 0610039A15 [Mus mus [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 30 kDa protein [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • Transmembrane protein 111 [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • transmembrane protein 111 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Transmembrane protein 111 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO RIKEN CDNA 0610039A15 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • hypothetical protein LOC312640 [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Tmem111 Transmembrane protein 111 [rat-ipi-250309-contam.fasta]
  • Transmembrane protein 111 OS=Rattus norvegicus GN=Tmem111 [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 261 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [IEA]
    cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPELLLDS NIRLWVVLPI VIITFFVGMI RHYVSILLQS DKKLTQEQVS DSQVLIRSRV  60
   61 LRENGKYIPK QSFLTRKYYF NNPEDGFFKK TKRKVVPPSP MTDPTMLTDM MKGNVTNVLP 120
  121 MILIGGWINM TFSGFVTTKV PFPLTLRFKP MLQQGIELLT LDASWVSSAS WYFLNVFGLR 180
  181 SIYSLILGQD NAADQSRMMQ EQMTGAAMAM PADTNKAFKT EWEALELTDH QWALDDVEEE 240
  241 LMARDLHFEG MFKKELQTSI F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] MSA 3.015948 View MSA. No confident structure predictions are available.
    2 View Details [188..261] MSA 1.015993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle