Protein Overview: PSPC1_RAT

General Information:
Name(s) found:	PSPC1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|71043686\|ref\|NP_001020843.1\| paraspeckle component 1 [Rattus norvegicus] [NCBI NR] gi\|68534606\|gb\|AAH99204.1\| Paraspeckle component 1 [Rattus norvegicus] [NCBI NR] gi\|149064062\|gb\|EDM14332.1\| paraspeckle protein 1 [Rattus norvegicus] [NCBI NR] gi\|123785742\|sp\|Q4KLH4.1\|PSPC1_RAT RecName: Full=Paraspeckle component 1 [NCBI NR] Paraspeckle component 1 OS=Rattus norvegicus GN=Pspc1 PE=1 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):15-34903323 [hmr_yeast5_DM3-1_pombe.fasta] Tax_Id=10116 Paraspeckle protein 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 PREDICTED: similar to Paraspeckle protein 1 [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta] Tax_Id=10116 Similar to RIKEN cDNA 5730470C09 [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta] Paraspeckle component 1 [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] paraspeckle protein 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Paraspeckle protein 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 SIMILAR TO RIKEN CDNA 5730470C09 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] paraspeckle component 1 [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Pspc1 Paraspeckle component 1 [rat-ipi-250309-contam.fasta] Paraspeckle component 1 OS=Rattus norvegicus GN=Pspc1 [011711_HMR.fasta] Paraspeckle component 1 OS=Rattus norvegicus GN=Pspc1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
Organism:	Rattus norvegicus
Length:	522 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA] cytoplasm [IEA] paraspeckles [UNKNOWN][IEA] nuclear matrix [IEA] nucleolus [IEA] nucleoplasm [UNKNOWN][IEA]
Biological Process:	regulation of transcription [IEA]
Molecular Function:	nucleotide binding [IEA] RNA binding [IEA] protein binding [UNKNOWN][IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLRGNLKQV RIEKNPARLR ALESAAGESE PVAAAAMALT LAGEQPPPPA PSEEHPDEEM  60
   61 GFTIDIKSFL KPGEKTYTQR CRLFVGNLPT DITEEDFKRL FERYGEPSEV FINRDRGFGF 120
  121 IRLESRTLAE IAKAELDGTI LKSRPLRIRF ATHGAALTVK NLSPVVSNEL LEQAFSQFGP 180
  181 VEKAVVVVDD RGRATGKGFV EFAAKPPARK ALERCGDGAF LLTTTPRPVI VEPMEQFDDE 240
  241 DGLPEKLMQK TQQYHKEREQ PPRFAQPGTF EFEYASRWKA LDEMEKQQRE QVDRNIREAK 300
  301 EKLEAEMEAA RHEHQLMLMR QDLMRRQEEL RRLEELRNQE LQKRKQIQLR HEEEHRRREE 360
  361 EMIRHREQEE LRRQQEGFKP NYMENREQEM RMGDMGPRGA INMGDAFSPA PAGTQGPPPM 420
  421 MGMNMNNRGT IPGPPMGPGP AMGPEGAANM GTPMIPDNGA VHNDRFPQGP PSQMGSPMGN 480
  481 RTGSETPQAP MSAVGPVSGG PGGFGRGSQG GNFEGPNKRR RY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.79

Protein Overview: PSPC1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: