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Protein Overview: RER1_RAT

General Information:
Name(s) found: RER1_RAT [Swiss-Prot]
Description(s) found:
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  • gi|84781666|ref|NP_001034101.1| RER1 retention in endoplasmic reticulum 1 homolog [Rattus norvegicus] [NCBI NR]
  • gi|71681283|gb|AAI00271.1| RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) [Rattus norvegicus] [NCBI NR]
  • ref|XP_216607.2| similar to RER1 homolog [Rattus norvegicus] [NCBI NR]
  • gi|149024788|gb|EDL81285.1| rCG30851 [Rattus norvegicus] [NCBI NR]
  • gi|118573308|sp|Q498C8.1|RER1_RAT RecName: Full=Protein RER1 [NCBI NR]
  • Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):5-192169851 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to RER1 homolog [HMR_022704-rand.fasta]
  • similar to RER1 homolog [Rattus norvegicus]gi|13385882|ref|NP_080671.1| RER1 homolog [Mus musculus]gi|20810133|gb|AAH29189.1| RER1 homolog [Mus musculus]gi|26347209|dbj|BAC37253.1| unnamed protein product [Mus musculus]gi|12850521|dbj|BAB28755.1| unna [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Hypothetical protein RGD1306324 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 RGD1306324_predicted protein [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta]
  • Tax_Id=10116 PREDICTED: similar to RER1 homolog [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta]
  • Tax_Id=10116 Similar to RER1 homolog [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • Protein RER1 [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • RER1 retention in endoplasmic reticulum 1 homolog [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • rCG30851 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO RER1 HOMOLOG [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Similar to RER1 homolog [Rattus norvegicus] [nr-271106-contam.fasta]
  • hypothetical protein LOC298675 [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Rer1 Protein RER1 [rat-ipi-250309-contam.fasta]
  • protein RER1 [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Protein RER1 OS=Rattus norvegicus GN=Rer1 [011711_HMR.fasta]
  • Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to Golgi membrane [UNKNOWN]
    integral to membrane [IEA]
    Golgi membrane [IEA]
    Golgi apparatus [IEA]
    Biological Process: retrograde vesicle-mediated transport, Golgi to ER [UNKNOWN]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEGDSVGDS VHGKPSVVYR FFSRLGQIYQ SWLDKSTPYT AVRWVVTLGL SFVYMIRVYL  60
   61 LQGWYIVTYA LGIYHLNLFI AFLSPKVDPS LMEDSDDGPS LPTKQNEEFR PFIRRLPEFK 120
  121 FWHAATKGIL VAMICTFFEA FNVPVFWPIL VMYFIMLFCI TMKRQIKHMI KYRYIPFTHG 180
  181 KRRYKGKEDV GKTFAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] Pfam 149.173925 No description for PF03248.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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