Protein Overview: RNF39_RAT

General Information:
Name(s) found:	RNF39_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|68052985\|sp\|Q920M2.1\|RNF39_RAT RecName: Full=RING finger protein 39; AltName: Full=LTP-induced RING finger protein [NCBI NR] gi\|46237688\|emb\|CAE84060.1\| Ring finger protein Lirf [Rattus norvegicus] [NCBI NR] gi\|19705477\|ref\|NP_599201.1\| ring finger protein 39 [Rattus norvegicus] [NCBI NR] gi\|16506132\|dbj\|BAB70703.1\| ring finger protein 39 [Rattus norvegicus] [NCBI NR] gi\|149029348\|gb\|EDL84608.1\| ring finger protein 39, isoform CRA_a [Rattus norvegicus] [NCBI NR] RING finger protein 39 OS=Rattus norvegicus GN=Rnf39 PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):20-2752722 RING finger protein LIRF [hmr_yeast5_DM3-1_pombe.fasta] RING finger protein LIRF [HMR_022704-rand.fasta] Ring finger protein Lirf [Rattus norvegicus]gi\|19705477\|ref\|NP_599201.1\| ring finger protein 39 [Rattus norvegicus]gi\|16506132\|dbj\|BAB70703.1\| ring finger protein 39 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 RING finger protein 39 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_134374) RING finger protein LIRF [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Tax_Id=10116 Ring finger protein 39 [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta] RING finger protein 39 (LTP-induced RING finger protein) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] ring finger protein 39 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] ring finger protein 39, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Ring finger protein Lirf [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 RING FINGER PROTEIN 39 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Rnf39 RING finger protein 39 [rat-ipi-250309-contam.fasta] RING finger protein 39 OS=Rattus norvegicus GN=Rnf39 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	352 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [IEA]
Biological Process:	regulation of neuronal synaptic plasticity [NAS]
Molecular Function:	zinc ion binding [IEA] protein binding [IEA] metal ion binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVPELGPGL VERLEQLATC PLCGGPFEDP VLLACEHSFC RSCLARCWGS PAAPGSEEAT  60
   61 PSCPCCGQPC PRRSLRSNVR LAVEVRISRG LREKLAEPGA RTGRRRGGRI PTMGCLDPQG 120
  121 EDMRKTWRRF DVPVPKSSNS EEDLPEDYPV VKNMLHRLTA DLTLDPRTAH RDLLISSDYR 180
  181 GVSLAPPGTP VPLDSPERFD RLRAVLGAQG FASGRHCWEV ETAEGACFRD SLAKDEDAGE 240
  241 SCYAVGAAGE SVTRKGLIKL CPSEAIWAVE GRGGRLWALT APEPTLLGGA RPPPQRIRVD 300
  301 LDWERGRVAF YDGRSLDLLF AFQAPGPLGE RVFPLLCTCD PRAPLRIVPG EA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: RNF39_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: