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Protein Overview: RL30_RAT

General Information:
Name(s) found: RL30_RAT [Swiss-Prot]
Description(s) found:
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  • pir||R6RT30 ribosomal protein L30, cytosolic [validated] - rat [NCBI NR]
  • gi|51702801|sp|P62890.2|RL30_RAT RecName: Full=60S ribosomal protein L30 [NCBI NR]
  • gi|34849857|gb|AAH58471.1| Ribosomal protein L30 [Rattus norvegicus] [NCBI NR]
  • gi|206728|gb|AAA42072.1| ribosomal protein L30 [NCBI NR]
  • gi|149066550|gb|EDM16423.1| rCG59779, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149066549|gb|EDM16422.1| rCG59779, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149052552|gb|EDM04369.1| rCG33788 [Rattus norvegicus] [NCBI NR]
  • gi|12083659|ref|NP_073190.1| ribosomal protein L30 [Rattus norvegicus] [NCBI NR]
  • 60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):7-95222464;10-36260570 ribosomal protein L30 [hmr_yeast5_DM3-1_pombe.fasta]
  • ribosomal protein L30 [HMR_022704-rand.fasta]
  • PREDICTED: similar to ribosomal protein L30 [Pan troglodytes]gi|488415|emb|CAA55820.1| ribosomal protein L30 [Homo sapiens]gi|12083659|ref|NP_073190.1| ribosomal protein L30 [Rattus norvegicus]gi|6677783|ref|NP_033109.1| ribosomal protein L30 [Mus musc [nrdb_11152004_Chlamydomonas]
  • (NM_022699) ribosomal protein L30 [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • Tax_Id=10116 Ensembl_locations(Chr-bp):7-95222464;10-36260570 ribosomal protein L30 [EBI-IPI_Drosophila_na_12-13-2007_con_reversed.fasta]
  • 60S ribosomal protein L30 [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • ribosomal protein L30 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • rCG59779, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • rCG33788 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Ribosomal protein L30 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 RIBOSOMAL PROTEIN L30 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Rpl30 60S ribosomal protein L30 [rat-ipi-250309-contam.fasta]
  • 60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 115 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [UNKNOWN]
    cytosol [UNKNOWN]
    ribosome [IEA]
    intracellular [IEA]
    Biological Process: translational elongation [UNKNOWN]
    translation [IEA]
    Molecular Function: structural constituent of ribosome [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAAKKTKKS LESINSRLQL VMKSGKYVLG YKQTLKMIRQ GKAKLVILAN NCPALRKSEI  60
   61 EYYAMLAKTG VHHYSGNNIE LGTACGKYYR VCTLAIIDPG DSDIIRSMPE QTGEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] PSI-BLAST 30.0 Localization and dynamic behavior of ribosomal protein L30e


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle