YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: APOC1_RAT

General Information:
Name(s) found: APOC1_RAT [Swiss-Prot]
Description(s) found:
Found 28 descriptions.
SHOW ALL
  • Apolipoprotein C-I OS=Rattus norvegicus GN=Apoc1 PE=3 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 88 amino acids

    Gene Ontology:
    Cellular Component: very-low-density lipoprotein particle [UNKNOWN][IDA]
    high-density lipoprotein particle [UNKNOWN][IDA]
    endoplasmic reticulum [UNKNOWN][IEA]
    extracellular region [IEA]
    cellular_component [ND]
    Biological Process: negative regulation of fatty acid biosynthetic process [UNKNOWN][IEA]
    chylomicron remnant clearance [UNKNOWN][IEA]
    cholesterol metabolic process [UNKNOWN][IEA]
    triglyceride metabolic process [UNKNOWN][IEA]
    lipoprotein metabolic process [TAS]
    negative regulation of lipid metabolic process [UNKNOWN]
    negative regulation of very-low-density lipoprotein particle clearance [UNKNOWN][IEA]
    negative regulation of lipoprotein lipase activity [UNKNOWN][IEA]
    negative regulation of phosphatidylcholine catabolic process [UNKNOWN][IEA]
    plasma lipoprotein particle remodeling [UNKNOWN]
    negative regulation of cholesterol transport [UNKNOWN][IEA]
    cholesterol efflux [UNKNOWN][IEA]
    negative regulation of receptor-mediated endocytosis [UNKNOWN][IEA]
    regulation of lipid transport [IDA]
    phospholipid efflux [UNKNOWN][IEA]
    negative regulation of lipid catabolic process [UNKNOWN]
    very-low-density lipoprotein particle clearance [UNKNOWN]
    Molecular Function: fatty acid binding [UNKNOWN][IEA]
    phospholipase inhibitor activity [UNKNOWN][IEA]
    lipase inhibitor activity [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFIALPVL IVVVAMALEG PAPAQAAPDF SSAMESLPDK LKEFGNTLED KARAAIEHIK  60
   61 QKEIMIKTRN WFSETLNKMK EKLKTTFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] PSI-BLAST 14.69897 HUMAN APOLIPOPROTEIN C-I, NMR, 18 STRUCTURES


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle