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Protein Overview: gi|125528310

General Information:
Name(s) found: gi|125528310 [NCBI NR]
Description(s) found:
  • gi|125528310|gb|EAY76424.1| hypothetical protein OsI_04357 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVAGGGE EGEELLLLSA VEAGSFGGGG DGGGAGAAAE KSWRLNFDGF RPPEVQQERR  60
   61 PPRGLHHHCL GVLSQGPEDV VAEYYQQQVE MLEGFNEMDT LTDRGFLPGM SKEEREKVAR 120
  121 SETLAIRLSN IANMVLFAAK VYASVRSGSL AIIASTLDSL LDLLSGFILW FTAFSMQTPN 180
  181 PYRYPIGKKR MQPLGILVFA SVMATLGLQI ILESVRSLLS DGDEFSLTKE QEKWVVDIML 240
  241 AVTLVKLALV LYCRTFTNEI VKAYAQDHFF DVITNMIGLV AALLATYIEG WIDPVGAIIL 300
  301 AIYTIRTWSM TVLENVHSLV GQSASPEYLQ KLTYLCWNHH KAVRHIDTVR AYTFGSHYFV 360
  361 EVDIVLPSSM PLQEAHDIGE ALQEKLERLP EIERAFVHLD YEFTHRPEHA LSHEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] deduced N/A No confident structure predictions are available.
    2 View Details [109..415] PSI-BLAST 60.0 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  0.0225298510244101 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.00888573638791978 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle