Protein Overview: RRP8_RAT

General Information:
Name(s) found:	RRP8_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|62900115\|sp\|Q5U4F0.1\|HUCE1_RAT RecName: Full=Cerebral protein 1 homolog [NCBI NR] gi\|56605770\|ref\|NP_001008347.1\| ribosomal RNA processing 8, methyltransferase, homolog [Rattus norvegicus] [NCBI NR] gi\|54648387\|gb\|AAH85119.1\| Similar to RIKEN cDNA 1500003O22 [Rattus norvegicus] [NCBI NR] ref\|XP_219127.2\| similar to RIKEN cDNA 1500003O22 [Rattus norvegicus] [NCBI NR] gi\|149068461\|gb\|EDM18013.1\| similar to RIKEN cDNA 1500003O22, isoform CRA_b [Rattus norvegicus] [NCBI NR] Ribosomal RNA-processing protein 8 OS=Rattus norvegicus GN=Rrp8 PE=1 SV=1 [Swiss-Prot] Cerebral protein 1 homolog OS=Rattus norvegicus PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):1-167892972 [hmr_yeast5_DM3-1_pombe.fasta] similar to RIKEN cDNA 1500003O22 [HMR_022704-rand.fasta] similar to RIKEN cDNA 1500003O22 [Rattus norvegicus]gi\|54648387\|gb\|AAH85119.1\| Unknown (protein for MGC:105831) [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Cerebral protein 1 homolog [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 Cerebral protein-1 homolog [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta] Tax_Id=10116 Similar to RIKEN cDNA 1500003O22 [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta] Cerebral protein 1 homolog [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] hypothetical protein LOC308911 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] similar to RIKEN cDNA 1500003O22, isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Similar to RIKEN cDNA 1500003O22 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 SIMILAR TO RIKEN CDNA 1500003O22 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=RGD1308302 Cerebral protein 1 homolog [rat-ipi-250309-contam.fasta] ribosomal RNA-processing protein 8 [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] Ribosomal RNA-processing protein 8 OS=Rattus norvegicus GN=Rrp8 [011711_HMR.fasta] Ribosomal RNA-processing protein 8 OS=Rattus norvegicus GN=Rrp8 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
Organism:	Rattus norvegicus
Length:	457 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA] rDNA heterochromatin [UNKNOWN][ISS] nucleolus [UNKNOWN][ISS] chromatin silencing complex [UNKNOWN][ISS]
Biological Process:	chromatin modification [IEA] chromatin silencing at rDNA [UNKNOWN][ISS] rRNA processing [IEA] regulation of transcription [IEA]
Molecular Function:	protein binding [UNKNOWN][IEA] methylated histone residue binding [UNKNOWN][ISS] methyltransferase activity [IEA] transferase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEEPEWVEA APAIVGLRPV TTQVQAATAP PVKGRKRRHL LATLRALEAA SLSQQCPSLP  60
   61 GSDSEEEEEV GRKKRHFQRS SLANVSKEVG KKRKGKCQKQ APFISDSEGK EVERTCHRQA 120
  121 PPLGGISAGE EKGKRKCQEY SYLHPTQSLN SVDQTVHNSR TSTATLDPPK SSRESASPNS 180
  181 SHTLSRKQWR NRQKNKRRHK NKFRPLETQD QVPLKASIEE TEVPPAPKSD SQETRAGALR 240
  241 ARMTQRLDGA RFRYLNEQLY SGPSSAAQCL FQEDPEAFLL YHRGFQRQVK KWPLHPVDRI 300
  301 AKDLRQKPAS LVVADFGCGD CRLASSVRNP VHCFDLAALD PRVTVCDMAQ VPLEDESVDV 360
  361 AVFCLSLMGT NIRDFLEEAN RVLKPGGLLK VAEVSSRFED IRTFLGAVTK LGFKVIYKDL 420
  421 TNSHFFLFDF EKTGPPRVGP KAQLSGLKLQ PCLYKHR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Protein Overview: RRP8_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: