YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|120601394, gi...

General Information:
Name(s) found: gi|120601394 [NCBI NR]
gi|120561623 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|120601394|ref|YP_965794.1| phosphate acetyltransferase [Desulfovibrio vulgaris subsp. vulgaris DP4] [NCBI NR]
  • gi|120561623|gb|ABM27367.1| phosphotransacetylase [Desulfovibrio vulgaris subsp. vulgaris DP4] [NCBI NR]
    • Organism: Desulfovibrio vulgaris DP4
    Length: 704 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNLYITAT ESKSGKSAVV LGMMQLLLRD VRKVAFFRPI INQASTDVRD HDINLILRHF  60
   61 GLDIAYEDTY AYSLQDAREL INNGQHATLL DNILKKYKKL EDAYDFVLCE GTDFLGKDAA 120
  121 FEFELNADIA ANLGCPVMVV ANGQQKAARE LIASTQLTID LLDEKGLDVV TAVINRATVT 180
  181 EAEREEIIKS LECKVNCSNP LAVYVLPEES TLGKPTMNDV KKWLGAQVLY GHGRLDTLVD 240
  241 DYIIAAMQIG NFLDYVSQGC LVITPGDRSD IILSSLASRL STAYPDISGL LLTGGLEPAA 300
  301 NVHRLIEGWT GVPIPILSVK DHTYKTIQTL NELYGKIEPD NDRKINTALA LFERHIDSSE 360
  361 LGSRLINRKS SRITPKMFEF NLIEKAKRNR MRIVLPEGAE ERILRAADIL VRREVADIIL 420
  421 LGDANTVGSR IGDLGLDMDG VQIVQPNLSP KFDEYVAAYH ECRKKKGISM EQARDMMNDP 480
  481 TYFGTMMVHK GDADGMVSGA INTTAHTIRP AFEFIKTKPG VSIVSSVFLM CLKDRVLVFG 540
  541 DCAVNPNPTA EQLAEIAISA SHTARIFGVD PRVAMLSYST GSSGKGADVE KVIEATRIAK 600
  601 ERAPELLLEG PLQYDAAIDM DVARTKLPGS TVAGQATVFI FPDLNTGNNT YKAVQRAAGA 660
  661 VAIGPVLQGL NKPVNDLSRG CTVADIVNTV AITAIQAQAE KGLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 26.221849 Cell division regulator MinD
    2 View Details [245..370] FFAS03 2.68 No description for 2iojA was found.
    3 View Details [371..466] FFAS03 2.63 Crystal Structure of a Phosphotransacetylase from Bacillus subtilis
    4 View Details [467..704] PSI-BLAST 89.522879 Crystal Structure of a Phosphotransacetylase from Streptococcus pyogenes

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.29060292615008 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • isocitrate dehydrogenase activity
    		•  4.07470589461733 bayes_pls_golite062009
  • isocitrate dehydrogenase (NAD+) activity
    		•  2.76980877987445 bayes_pls_golite062009
  • catalytic activity
    		•  2.71251959637136 bayes_pls_golite062009
  • isocitrate dehydrogenase (NADP+) activity
    		•  2.37654914320201 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.34383793575786 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.23338300186555 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.23134321553105 bayes_pls_golite062009
  • acetyltransferase activity
    		•  0.475874744828042 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle