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Protein Overview: BL1S1_RAT

General Information:
Name(s) found: BL1S1_RAT [Swiss-Prot]
Description(s) found:
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  • gi|27710656|ref|XP_213833.1| PREDICTED: similar to Biogenesis of lysosome-related organelles complex-1, subunit 1 (BLOC-1 subunit 1) (GCN5-like protein 1) (RT14 protein) [Rattus norvegicus] [NCBI NR]
  • gi|149029613|gb|EDL84784.1| biogenesis of lysosome-related organelles complex-1, subunit 1 (predicted), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|109481419|ref|XP_001068887.1| PREDICTED: similar to Biogenesis of lysosome-related organelles complex-1, subunit 1 (BLOC-1 subunit 1) (GCN5-like protein 1) (RT14 protein) [Rattus norvegicus] [NCBI NR]
  • Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus GN=Bloc1s1 PE=3 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):13-2157293 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to GCN5-like protein 1 (RT14 protein) [HMR_022704-rand.fasta]
  • similar to GCN5-like protein 1 (RT14 protein) [Rattus norvegicus]gi|4503955|ref|NP_001478.1| GCN5 general control of amino-acid synthesis 5-like 1 [Homo sapiens]gi|2136132|pir||JC4392 RT14 protein - humangi|1703640|gb|AAB37682.1| GCN5-like 1; GCN5L1 [H [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PREDICTED: similar to Biogenesis of lysosome-related organelles complex-1, subunit 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 PREDICTED: similar to Biogenesis of lysosome-related organelles complex-1, subunit 1 (BLOC-1 subunit 1) (GCN5-like protein 1) (RT14 protein) [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta]
  • Tax_Id=10116 Similar to GCN5-like protein 1 (RT14 protein) [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • biogenesis of lysosome-related organelles complex-1, subunit 1 (predicted), isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO GCN5-LIKE PROTEIN 1 (RT14 PROTEIN) [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • PREDICTED: similar to Biogenesis of lysosome-related organelles complex-1, subunit 1 (BLOC-1 subunit 1) (GCN5-like protein 1) (RT14 protein) [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 [rat-ipi-250309-contam.fasta]
  • Biogenesis of lysosome-related organelles complex-1, subunit 1 (Predicted), isoform CRA_a OS=Rattus norvegicus GN=Bloc1s1 [011711_HMR.fasta]
  • Biogenesis of lysosome-related organelles complex-1, subunit 1 (Predicted), isoform CRA_a OS=Rattus norvegicus GN=Bloc1s1 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 125 amino acids

    Gene Ontology:
    Cellular Component: BLOC-1 complex [UNKNOWN]
    mitochondrion [UNKNOWN]
    cytosol [UNKNOWN]
    cellular_component [ND]
    Biological Process: biological_process [ND]
    cellular membrane organization [UNKNOWN]
    post-Golgi vesicle-mediated transport [UNKNOWN]
    Molecular Function: protein binding [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRLLKEHQ AKQNERKELQ EKRRREAITA ATCLTEALVD HLNVGVAQAY MNQRKLDHEV  60
   61 KTLQVQAAQF AKQTGQWIGM VENFNQALKE IGDVENWARS IELDMRTIAT ALEYVYKGQL 120
  121 QSAPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] Pfam 101.251812 No description for PF06320.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle