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Protein Overview: COX5B_RAT

General Information:
Name(s) found: COX5B_RAT [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus GN=Cox5b PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 129 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [UNKNOWN][IEA]
    membrane [IEA]
    cellular_component [ND]
    mitochondrial envelope [IEA]
    mitochondrial inner membrane [UNKNOWN][IEA]
    Biological Process: response to hormone stimulus [IEP]
    response to peptide hormone stimulus [IEP]
    Molecular Function: cytochrome-c oxidase activity [TAS]
    metal ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRLLRGVG ALAAQALRAH GPRGVAATRS MASGGGVPTD EEQATGLERE IMIAAQRGLD  60
   61 PYNMLPPKAA SGTKEDPNLV PSVSNKRIVG CICEEDNCTV IWFWLHQGES QRCPNCGTHY 120
  121 KLVPYQMVH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] PSI-BLAST 45.30103 Cytochrome c oxidase Subunit F

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  0.942365217032167 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.942365217032167 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.942365217032167 bayes_pls_golite062009
  • binding
    		•  0.925615758639096 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  0.706848307362399 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.0832654869651861 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.00798941779972262 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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