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Protein Overview: gi|12667083

General Information:
Name(s) found: gi|12667083 [NCBI NR]
Description(s) found:
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  • gi|12667083|emb|CAC28142.1| MHC class II antigen, alpha chain [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):20-5571088 MHC class II antigen, alpha chain precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • MHC class II antigen, alpha chain [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 MHC CLASS II ANTIGEN, ALPHA CHAIN PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 138 amino acids

    Gene Ontology:
    Cellular Component: external side of plasma membrane [UNKNOWN]
    plasma membrane [UNKNOWN]
    lysosome [UNKNOWN]
    Biological Process: immunoglobulin mediated immune response [UNKNOWN]
    defense response [UNKNOWN]
    antigen processing and presentation of exogenous peptide antigen via MHC class II [UNKNOWN]
    positive regulation of immune response [UNKNOWN]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIRFFFMAVL MSPQKSWAIR EEHTIIQAEF YLSPDQNGEF MFDFDGDEIF HVDIKKSETI  60
   61 WRLEEFAQFA SFEAQGALAN IAVDKANLDI MIKRSNNTPD ANVIPEVTVL PKSPVNLGEP 120
  121 NILICFIDKF SPPAVNVT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle