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Protein Overview: SBDS_MOUSE

General Information:
Name(s) found: SBDS_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|74223057|dbj|BAE40670.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|23956138|ref|NP_075737.1| Shwachman-Bodian-Diamond syndrome homolog [Mus musculus] [NCBI NR]
  • gi|20532375|sp|P70122.4|SBDS_MOUSE RecName: Full=Ribosome maturation protein SBDS; AltName: Full=Shwachman-Bodian-Diamond syndrome protein homolog; AltName: Full=Protein 22A3 [NCBI NR]
  • gi|148687524|gb|EDL19471.1| Shwachman-Bodian-Diamond syndrome homolog (human) [Mus musculus] [NCBI NR]
  • gi|13277966|gb|AAH03849.1| Shwachman-Bodian-Diamond syndrome homolog (human) [Mus musculus] [NCBI NR]
  • gi|12859325|dbj|BAB31612.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|12852636|dbj|BAB29487.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|12836762|dbj|BAB23803.1| unnamed protein product [Mus musculus] [NCBI NR]
  • Ribosome maturation protein SBDS OS=Mus musculus GN=Sbds PE=1 SV=4 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):5-127644474 Shwachman-Bodian-Diamond syndrome protein homolog [hmr_yeast5_DM3-1_pombe.fasta]
  • Shwachman-Bodian-Diamond syndrome homolog [HMR_022704-rand.fasta]
  • Shwachman-Bodian-Diamond syndrome protein homolog [ipi.MOUSE.v3.06.fasta]
  • Shwachman-Bodian-Diamond syndrome homolog [Mus musculus]gi|13277966|gb|AAH03849.1| Shwachman-Bodian-Diamond syndrome homolog [Mus musculus]gi|20532375|sp|P70122|SBDS_MOUSE Shwachman-Bodian-Diamond syndrome protein homolog (Protein 22A3)gi|12859325|dbj| [nrdb_11152004_Chlamydomonas]
  • Shwachman-Bodian-Diamond syndrome homolog [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Shwachman-Bodian-Diamond syndrome protein homolog [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • Ribosome maturation protein SBDS (Shwachman-Bodian-Diamond syndrome protein homolog) (Protein 22A3) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Shwachman-Bodian-Diamond syndrome homolog (human) [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 SHWACHMAN-BODIAN-DIAMOND SYNDROME PROTEIN HOMOLOG [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Sbds Ribosome maturation protein SBDS [mouse-ipi-250309-contam.fasta]
  • Shwachman-Bodian-Diamond syndrome protein homolog (Protein 22A3) [nr-271106-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Sbds Shwachman-Bodian-Diamond syndrome protein homolog [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Sbds Shwachman-Bodian-Diamond syndrome protein homolog ENSMUSG00000025337 IPI00136151 IPI00882029 IPI00881386 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • ribosome maturation protein SBDS [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00136151.4|SWISS-PROT:P70122|ENSEMBL:ENSMUSP00000026387|REFSEQ:NP_075737|VEGA:OTTMUSP00000035058 Tax_Id=10090 Gene_Symbol=Sbds Ribosome maturation protein SBDS [ipi.MOUSE.fasta.20090209]
  • Ribosome maturation protein SBDS OS=Mus musculus GN=Sbds [011711_HMR.fasta]
  • Ribosome maturation protein SBDS OS=Mus musculus GN=Sbds PE=2 SV=4 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|P70122|SBDS_MOUSE Ribosome maturation protein SBDS OS=Mus musculus GN=Sbds PE=1 SV=4 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIFTPTNQI RLTNVAVVRM KRGGKRFEIA CYKNKVVGWR SGVEKDLDEV LQTHSVFVNV  60
   61 SKGQVAKKED LISAFGTDDQ TEICKQILTK GEVQVSDKER HTQLEQMFRD IATIVADKCV 120
  121 NPETKRPYTV ILIERAMKDI HYSVKPNKST KQQALEVIKQ LKEKMKIERA HMRLRFILPV 180
  181 NEGKKLKEKL KPLMKVVESE DYSQQLEIVC LIDPGCFREI DELIKKETKG RGSLEVLSLK 240
  241 DVEEGDEKFE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 78.522879 Structure of a hypothetical protein AF0491 from Archaeoglobus fulgidus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle