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Protein Overview: DSS1_MOUSE

General Information:
Name(s) found: DSS1_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|74204332|dbj|BAE39921.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74179960|dbj|BAE36534.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74137477|dbj|BAE35785.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|6677941|ref|NP_033195.1| split hand/foot deleted gene 1 [Mus musculus] [NCBI NR]
  • gi|46397409|sp|P60897.1|DSS1_MOUSE RecName: Full=26S proteasome complex subunit DSS1; AltName: Full=Split hand/foot malformation type 1 protein homolog; AltName: Full=Deleted in split hand/split foot protein 1 homolog; AltName: Full=Split hand/foot delete [NCBI NR]
  • gi|34785617|gb|AAH58117.1| Split hand/foot malformation (ectrodactyly) type 1 [Mus musculus] [NCBI NR]
  • gi|19484173|gb|AAH23490.1| Split hand/foot malformation (ectrodactyly) type 1 [Mus musculus] [NCBI NR]
  • gi|148682010|gb|EDL13957.1| split hand/foot malformation (ectrodactyly) type 1 [Mus musculus] [NCBI NR]
  • gi|1209726|gb|AAA91180.1| Method: conceptual translation supplied by author [NCBI NR]
  • 26S proteasome complex subunit DSS1 OS=Mus musculus GN=Shfm1 PE=3 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):6-6301549 Deleted in split hand/split foot protein 1 [hmr_yeast5_DM3-1_pombe.fasta]
  • split hand/foot deleted gene 1 [HMR_022704-rand.fasta]
  • 26 proteasome complex subunit DSS1 [ipi.MOUSE.v3.06.fasta]
  • unknown [Homo sapiens]gi|51094880|gb|EAL24125.1| split hand/foot malformation (ectrodactyly) type 1 [Homo sapiens]gi|5453640|ref|NP_006295.1| candidate for split hand/foot malformation type 1 [Homo sapiens]gi|6677941|ref|NP_033195.1| split hand/foot de [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 26 proteasome complex subunit DSS1 [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_009169) split hand/foot deleted gene 1 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • split hand/foot deleted gene 1 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • 26 proteasome complex subunit DSS1 (Split hand/foot malformation type 1 protein homolog) (Deleted in split hand/split foot protein 1 homolog) (Split hand/foot deleted protein 1 homolog) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • split hand/foot malformation (ectrodactyly) type 1 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Split hand/foot malformation (ectrodactyly) type 1 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Method: conceptual translation supplied by author [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 26 PROTEASOME COMPLEX SUBUNIT DSS1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Shfm1 26S proteasome complex subunit DSS1 [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Shfm1 26 proteasome complex subunit DSS1 [ipi.MOUSE_jw_12may08.contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Shfm1 26 proteasome complex subunit DSS1 ENSMUSG00000042541 IPI00112728 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • 26S proteasome complex subunit DSS1 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00112728.1|SWISS-PROT:P60897|TREMBL:Q3TV35|ENSEMBL:ENSMUSP00000040741|REFSEQ:NP_033195|VEGA:OTTMUSP00000029297 Tax_Id=10090 Gene_Symbol=Shfm1 26S proteasome complex subunit DSS1 [ipi.MOUSE.fasta.20090209]
  • 26S proteasome complex subunit DSS1 OS=Mus musculus GN=Shfm1 [011711_HMR.fasta]
  • 26S proteasome complex subunit DSS1 OS=Mus musculus GN=Shfm1 PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|P60897|DSS1_MOUSE 26S proteasome complex subunit DSS1 OS=Mus musculus GN=Shfm1 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|Q3TV35|Q3TV35_MOUSE Split hand/foot malformation (Ectrodactyly) type 1 OS=Mus musculus GN=Shfm1 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Split hand/foot malformation (Ectrodactyly) type 1 OS=Mus musculus GN=Shfm1 PE=4 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Putative uncharacterized protein OS=Mus musculus GN=Shfm1 PE=2 SV=1 [UniProt_mouse_01-27-2011_reversed.fasta]
  • Split hand/foot malformation (Ectrodactyly) type 1 OS=Mus musculus GN=Shfm1 PE=2 SV=1 [mouse-uniprot-oct2014-contam.fasta]
  • Isoform of P60897, 26S proteasome complex subunit DSS1 OS=Mus musculus GN=Shfm1 PE=2 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 70 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKKQPVDL GLLEEDDEFE EFPAEDWAGL DEDEDAHVWE DNWDDDNVED DFSNQLRAEL  60
   61 EKHGYKMETS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] Pfam 34.309804 No description for PF05160.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle