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Protein Overview: TM50A_MOUSE

General Information:
Name(s) found: TM50A_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|74228042|dbj|BAE37992.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74227011|dbj|BAE38309.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74220850|dbj|BAE31391.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74220808|dbj|BAE31373.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74178664|dbj|BAE34003.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74151046|dbj|BAE27652.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|62826002|gb|AAH94256.1| Transmembrane protein 50A [Mus musculus] [NCBI NR]
  • gi|34610239|ref|NP_082211.1| transmembrane protein 50A [Mus musculus] [NCBI NR]
  • gi|24638220|sp|Q9CXL1.1|TM50A_MOUSE RecName: Full=Transmembrane protein 50A; AltName: Full=Small membrane protein 1 [NCBI NR]
  • gi|23978469|dbj|BAC21152.1| small mebrane protein 1 [Mus musculus] [NCBI NR]
  • gi|148698051|gb|EDL29998.1| transmembrane protein 50A [Mus musculus] [NCBI NR]
  • gi|12852025|dbj|BAB29242.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|123248699|emb|CAM26946.1| transmembrane protein 50A [Mus musculus] [NCBI NR]
  • Transmembrane protein 50A OS=Mus musculus GN=Tmem50a PE=1 SV=1 [Swiss-Prot]
  • (Q9CXL1) Small membrane protein 1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):4-132957899 Small membrane protein 1 [hmr_yeast5_DM3-1_pombe.fasta]
  • small membrane protein 1 [HMR_022704-rand.fasta]
  • Small membrane protein 1 [ipi.MOUSE.v3.06.fasta]
  • small membrane protein 1 [Mus musculus]gi|23978469|dbj|BAC21152.1| small mebrane protein 1 [Mus musculus]gi|24638220|sp|Q9CXL1|SMP1_MOUSE Small membrane protein 1gi|12852025|dbj|BAB29242.1| unnamed protein product [Mus musculus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Transmembrane protein 50A [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • small membrane protein 1 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Small membrane protein 1 [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • Transmembrane protein 50A (Small membrane protein 1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • transmembrane protein 50A [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Transmembrane protein 50A [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • small mebrane protein 1 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 SMALL MEMBRANE PROTEIN 1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem50a Transmembrane protein 50A [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem50a Transmembrane protein 50A ENSMUSG00000028822 IPI00110453 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • IPI:IPI00110453.1|SWISS-PROT:Q9CXL1|TREMBL:Q52KP1|ENSEMBL:ENSMUSP00000030626;ENSMUSP00000101489|REFSEQ:NP_082211|VEGA:OTTMUSP00000011892;OTTMUSP00000011893 Tax_Id=10090 Gene_Symbol=Tmem50a Transmembrane protein 50A [ipi.MOUSE.fasta.20090209]
  • Transmembrane protein 50A OS=Mus musculus GN=Tmem50a [011711_HMR.fasta]
  • Transmembrane protein 50A OS=Mus musculus GN=Tmem50a PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q9CXL1|TM50A_MOUSE Transmembrane protein 50A OS=Mus musculus GN=Tmem50a PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|Q52KP1|Q52KP1_MOUSE Transmembrane protein 50A OS=Mus musculus GN=Tmem50a PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Putative uncharacterized protein OS=Mus musculus GN=Tmem50a PE=2 SV=1 [UniProt_mouse_01-27-2011_reversed.fasta]
  • Isoform of Q9CXL1, Transmembrane protein 50A OS=Mus musculus GN=Tmem50a PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 157 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFLEGSRC SECMDWGEKR NTIASIAAGV LFFTGWWIII DAAVMYPRMD QFNHSYHTCG  60
   61 VIATIAFLMI NAVSNGQVRG DSYSEGCLGQ TGARIWLFIG FMLAFGSLIA SMWILFGGYV 120
  121 AKEKDVVYPG IAVFFQNAFI FFGGLVFKFG RTEDLWQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] Pfam 100.21467 No description for PF05255.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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