Protein Overview: SYF2_MOUSE

General Information:
Name(s) found:	SYF2_MOUSE [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81916941\|sp\|Q9D198.1\|SYF2_MOUSE RecName: Full=Pre-mRNA-splicing factor SYF2; AltName: Full=CCNDBP1-interactor; AltName: Full=p29; AltName: Full=mp29 [NCBI NR] gi\|74220575\|dbj\|BAE31500.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|30185799\|gb\|AAH51484.1\| SYF2 homolog, RNA splicing factor (S. cerevisiae) [Mus musculus] [NCBI NR] gi\|27372623\|gb\|AAO06147.1\| mp29 [Mus musculus] [NCBI NR] gi\|21312064\|ref\|NP_081056.1\| SYF2 homolog, RNA splicing factor [Mus musculus] [NCBI NR] gi\|148698047\|gb\|EDL29994.1\| SYF2 homolog, RNA splicing factor (S. cerevisiae) [Mus musculus] [NCBI NR] gi\|14192751\|gb\|AAK54459.1\| GCIP-interacting protein p29 [Mus musculus] [NCBI NR] gi\|12834664\|dbj\|BAB22995.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|123248702\|emb\|CAM26949.1\| SYF2 homolog, RNA splicing factor (S. cerevisiae) [Mus musculus] [NCBI NR] Pre-mRNA-splicing factor SYF2 OS=Mus musculus GN=Syf2 PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):4-132990859 1110018L13Rik protein [hmr_yeast5_DM3-1_pombe.fasta] GCIP-interacting protein p29; CCNDBP1 interactor [HMR_022704-rand.fasta] Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110018L13 product:DJ465N24.1 [ipi.MOUSE.v3.06.fasta] GCIP-interacting protein p29 [Mus musculus]gi\|30185799\|gb\|AAH51484.1\| GCIP-interacting protein p29 [Mus musculus]gi\|27372623\|gb\|AAO06147.1\| mp29 [Mus musculus]gi\|14192751\|gb\|AAK54459.1\| GCIP-interacting protein p29 [Mus musculus]gi\|12834664\|dbj\|BAB229 [nrdb_11152004_Chlamydomonas] Tax_Id=10090 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110018L13 product:DJ465N24.1 [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta] (NM_026780) RIKEN cDNA 1110018L13 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] CCNDBP1 interactor [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta] Tax_Id=10090 Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110018L13 product:DJ465N24.1 [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta] SYF2 homolog, RNA splicing factor [Mus musculus] [NCBI-RefSeq_mouse_na_03-19-2007_reversed.fasta] Pre-mRNA-splicing factor SYF2 (CCNDBP1-interactor) (p29) (mp29) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] SYF2 homolog, RNA splicing factor (S. cerevisiae) [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] mp29 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] GCIP-interacting protein p29 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10090 MUS MUSCULUS 18-DAY EMBRYO WHOLE BODY CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:1110018L13 PRODUCT:DJ465N24.1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10090 Gene_Symbol=Syf2 Pre-mRNA-splicing factor SYF2 [mouse-ipi-250309-contam.fasta] Tax_Id=10090 Gene_Symbol=Syf2 Pre-mRNA-splicing factor SYF2 ENSMUSG00000028821 IPI00133410 [IPIxENS.MOUSE_plus_REVERSE.fasta] pre-mRNA-splicing factor SYF2 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta] IPI:IPI00133410.1\|SWISS-PROT:Q9D198\|TREMBL:B1AS87\|ENSEMBL:ENSMUSP00000030622\|REFSEQ:NP_081056\|VEGA:OTTMUSP00000011890 Tax_Id=10090 Gene_Symbol=Syf2 Pre-mRNA-splicing factor SYF2 [ipi.MOUSE.fasta.20090209] Pre-mRNA-splicing factor SYF2 OS=Mus musculus GN=Syf2 [011711_HMR.fasta] sp\|Q9D198\|SYF2_MOUSE Pre-mRNA-splicing factor SYF2 OS=Mus musculus GN=Syf2 PE=2 SV=1 [uniprot.sptr.mouse.20130102] tr\|B1AS87\|B1AS87_MOUSE SYF2 homolog, RNA splicing factor (S. cerevisiae) OS=Mus musculus GN=Syf2 PE=4 SV=1 [uniprot.sptr.mouse.20130102] SYF2 homolog, RNA splicing factor (S. cerevisiae) OS=Mus musculus GN=Syf2 PE=4 SV=1 [mouse-uniprot-290313-contam.fasta]
Organism:	Mus musculus
Length:	242 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVTEVVVP ADGAEARPLA AEELAAQKRE QRLRKFRELH LKRNEARKLN HQEVVEEDKR  60
   61 LKLPANWEAK KARLEWELQE EEKKKECAAR GEDYEKVKLL EISAEDAERW ERRKKKKNPD 120
  121 LGFSDYAAAQ LRQYHRLTKQ IKPDMESYER QREKHGEDFF PTSNSLLHGT HVPSSEEIDR 180
  181 MVLDLEKQIE KRDKYSRRRP YNDDADIDYI NERNAKFNKK AERFYGKYTA EIKQNLERGT 240
  241 AV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..242]	FFAS03	1.07	Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: SYF2_MOUSE

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: