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Protein Overview: RM50_MOUSE

General Information:
Name(s) found: RM50_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|30519921|ref|NP_848718.1| mitochondrial ribosomal protein L50 [Mus musculus] [NCBI NR]
  • gi|26344618|dbj|BAC35958.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|26340164|dbj|BAC33745.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|26327131|dbj|BAC27309.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|148670371|gb|EDL02318.1| mitochondrial ribosomal protein L50 [Mus musculus] [NCBI NR]
  • gi|12840936|dbj|BAB25017.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|12832851|dbj|BAB22283.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|12832785|dbj|BAB22257.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|123858485|emb|CAM21770.1| mitochondrial ribosomal protein L50 [Mus musculus] [NCBI NR]
  • gi|118573686|sp|Q8VDT9.2|RM50_MOUSE RecName: Full=39S ribosomal protein L50, mitochondrial; Short=L50mt; Short=MRP-L50 [NCBI NR]
  • 39S ribosomal protein L50, mitochondrial OS=Mus musculus GN=Mrpl50 PE=1 SV=2 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):4-48338358 DNA segment, Chr 4, Wayne state University 125, expressed [hmr_yeast5_DM3-1_pombe.fasta]
  • mitochondrial ribosomal protein L50 [HMR_022704-rand.fasta]
  • mitochondrial ribosomal protein L50 [Mus musculus]gi|26344618|dbj|BAC35958.1| unnamed protein product [Mus musculus]gi|26340164|dbj|BAC33745.1| unnamed protein product [Mus musculus]gi|26327131|dbj|BAC27309.1| unnamed protein product [Mus musculus]gi| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Mrpl50 protein [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • mitochondrial ribosomal protein L50 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Mitochondrial 39S ribosomal protein L50 (L50mt) (MRP-L50) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Mrpl50 39S ribosomal protein L50, mitochondrial [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Mrpl50 Mitochondrial 39S ribosomal protein L50 [ipi.MOUSE_jw_12may08.contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Mrpl50 Mitochondrial 39S ribosomal protein L50 ENSMUSG00000044018 IPI00133122 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • 39S ribosomal protein L50, mitochondrial [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00133122.3|SWISS-PROT:Q8VDT9|TREMBL:A2AKK8|ENSEMBL:ENSMUSP00000062476|REFSEQ:NP_848718|VEGA:OTTMUSP00000008709 Tax_Id=10090 Gene_Symbol=Mrpl50 39S ribosomal protein L50, mitochondrial [ipi.MOUSE.fasta.20090209]
  • 39S ribosomal protein L50, mitochondrial OS=Mus musculus GN=Mrpl50 [011711_HMR.fasta]
  • 39S ribosomal protein L50, mitochondrial OS=Mus musculus GN=Mrpl50 PE=2 SV=2 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q8VDT9|RM50_MOUSE 39S ribosomal protein L50, mitochondrial OS=Mus musculus GN=Mrpl50 PE=2 SV=2 [uniprot.sptr.mouse.20130102]
  • tr|A2AKK8|A2AKK8_MOUSE Mitochondrial ribosomal protein L50 OS=Mus musculus GN=Mrpl50 PE=4 SV=1 [uniprot.sptr.mouse.20130102]
  • Mitochondrial ribosomal protein L50 OS=Mus musculus GN=Mrpl50 PE=4 SV=1 [UniProt_mouse_01-27-2011_reversed.fasta]
    • Organism: Mus musculus
    Length: 159 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALIVSRLA RRGWLWKLPL ATRREFWSRS RKEKEPVVAE TVEEVKKEPV LVCPPLRSRA  60
   61 YTPPSDLQSR LESHIKEVLG SSLPNNWQDI SLDDGHMKFR LLAGLADGLG HAVPNSRLHQ 120
  121 MCRVRDVLDF YNVPVQDKSK FDELVASNLP PNLKISWSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] FFAS03 1.11 Crystal structure of Acyl carrier protein (TM0175) from Thermotoga maritima at 2.00 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  0.340809137326983 bayes_pls_golite062009
  • binding
    		•  0.0138468891652167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle