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Protein Overview: PBDC1_MOUSE

General Information:
Name(s) found: PBDC1_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|81916920|sp|Q9D0B6.1|CX026_MOUSE RecName: Full=UPF0368 protein Cxorf26 homolog [NCBI NR]
  • gi|54781431|gb|AAH44719.1| RIKEN cDNA 2610029G23 gene [Mus musculus] [NCBI NR]
  • gi|54673526|gb|AAH35042.1| RIKEN cDNA 2610029G23 gene [Mus musculus] [NCBI NR]
  • gi|38511665|gb|AAH61070.1| RIKEN cDNA 2610029G23 gene [Mus musculus] [NCBI NR]
  • gi|26326501|dbj|BAC26994.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|148682126|gb|EDL14073.1| RIKEN cDNA 2610029G23 [Mus musculus] [NCBI NR]
  • gi|13385810|ref|NP_080588.1| hypothetical protein LOC67683 [Mus musculus] [NCBI NR]
  • gi|12847846|dbj|BAB27731.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|123121723|emb|CAM18671.1| novel protein containing Domain of Unknown Function (DUF757) [Mus musculus] [NCBI NR]
  • Protein PBDC1 OS=Mus musculus GN=Pbdc1 PE=1 SV=1 [Swiss-Prot]
  • UPF0368 protein Cxorf26 homolog OS=Mus musculus PE=2 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):X-90006800 2610029G23Rik protein [hmr_yeast5_DM3-1_pombe.fasta]
  • RIKEN cDNA 2610029G23 [HMR_022704-rand.fasta]
  • Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610029G23 product:weakly similar to RE39629P [ipi.MOUSE.v3.06.fasta]
  • RIKEN cDNA 2610029G23 [Mus musculus]gi|54673526|gb|AAH35042.1| RIKEN cDNA 2610029G23 [Mus musculus]gi|13385810|ref|NP_080588.1| RIKEN cDNA 2610029G23 [Mus musculus]gi|38511665|gb|AAH61070.1| RIKEN cDNA 2610029G23 [Mus musculus]gi|26326501|dbj|BAC26994 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610029G23 product:weakly similar to RE39629P [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_026312) RIKEN cDNA 2610029G23 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • hypothetical protein LOC67683 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610029G23 product:weakly similar to RE39629P [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • UPF0368 protein Cxorf26 homolog [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • novel protein containing Domain of Unknown Function (DUF757) [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • RIKEN cDNA 2610029G23 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • RIKEN cDNA 2610029G23 gene [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MUS MUSCULUS 10 DAYS EMBRYO WHOLE BODY CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:2610029G23 PRODUCT:WEAKLY SIMILAR TO RE39629P [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=2610029G23Rik Isoform 1 of UPF0368 protein Cxorf26 homolog [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=2610029G23Rik Isoform 1 of UPF0368 protein Cxorf26 homolog ENSMUSG00000031226 IPI00132352 IPI00798535 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • IPI:IPI00132352.2|SWISS-PROT:Q9D0B6-1|TREMBL:B1AUP4|ENSEMBL:ENSMUSP00000033577|REFSEQ:NP_080588|VEGA:OTTMUSP00000019630 Tax_Id=10090 Gene_Symbol=2610029G23Rik Isoform 1 of UPF0368 protein Cxorf26 homolog [ipi.MOUSE.fasta.20090209]
  • Isoform 1 of UPF0368 protein Cxorf26 homolog OS=Mus musculus [011711_HMR.fasta]
  • sp|Q9D0B6|CX026_MOUSE UPF0368 protein Cxorf26 homolog OS=Mus musculus PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|B1AUP4|B1AUP4_MOUSE RIKEN cDNA 2610029G23 OS=Mus musculus GN=2610029G23Rik PE=4 SV=1 [uniprot.sptr.mouse.20130102]
  • Protein PBDC1 OS=Mus musculus GN=Pbdc1 PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Putative uncharacterized protein OS=Mus musculus GN=2610029G23Rik PE=4 SV=1 [UniProt_mouse_01-27-2011_reversed.fasta]
    • Organism: Mus musculus
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAAGESEEP VSGEALSIAH ALSHPPESYG NDPDIEMAWA IRAMQHAEVY YKLISSVDPQ  60
   61 FLKLTKVDDQ IYSEFREIFE TLRVDVLDPE ELKSESAKEK WRPFCLKFEG IVEDYNYGTL 120
  121 LRLDCSQGYT EENTIFAPRI QFFAIEIARN REGYNKAVSV SIQDKEGEEG AGNKEEAAEK 180
  181 GADSGGEKEE GANREGEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] Pfam 108.657577 No description for PF05516.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle