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Protein Overview: RM54_MOUSE

General Information:
Name(s) found: RM54_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|81880349|sp|Q9CPW3.1|RM54_MOUSE RecName: Full=39S ribosomal protein L54, mitochondrial; Short=L54mt; Short=MRP-L54; Flags: Precursor [NCBI NR]
  • gi|34785228|gb|AAH56985.1| Mitochondrial ribosomal protein L54 [Mus musculus] [NCBI NR]
  • gi|148699488|gb|EDL31435.1| mitochondrial ribosomal protein L54 [Mus musculus] [NCBI NR]
  • gi|13384682|ref|NP_079593.1| mitochondrial ribosomal protein L54 [Mus musculus] [NCBI NR]
  • gi|12844587|dbj|BAB26421.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|12833761|dbj|BAB22654.1| unnamed protein product [Mus musculus] [NCBI NR]
  • 39S ribosomal protein L54, mitochondrial OS=Mus musculus GN=Mrpl54 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):10-81098182 0610008M19Rik protein [hmr_yeast5_DM3-1_pombe.fasta]
  • mitochondrial ribosomal protein L54 [HMR_022704-rand.fasta]
  • mitochondrial ribosomal protein L54 [Mus musculus]gi|34785228|gb|AAH56985.1| Mitochondrial ribosomal protein L54 [Mus musculus]gi|12844587|dbj|BAB26421.1| unnamed protein product [Mus musculus]gi|12833761|dbj|BAB22654.1| unnamed protein product [Mus mu [nrdb_11152004_Chlamydomonas]
  • Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310037D04 product:mitochondrial ribosomal protein L54, full insert sequence [ipi.MOUSE.v3.06.fasta]
  • Tax_Id=10090 Adult male tongue cDNA, RIKEN full-length enriched library, clone:2310037D04 product:mitochondrial ribosomal protein L54, full insert sequence [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_025317) mitochondrial ribosomal protein L54 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • mitochondrial ribosomal protein L54 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310037D04 product:mitochondrial ribosomal protein L54, full insert sequence [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • 39S ribosomal protein L54, mitochondrial precursor (L54mt) (MRP-L54) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Mitochondrial ribosomal protein L54 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MUS MUSCULUS ADULT MALE TONGUE CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:2310037D04 PRODUCT:MITOCHONDRIAL RIBOSOMAL PROTEIN L54, FULL INSERT SEQUENCE [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Mrpl54 39S ribosomal protein L54, mitochondrial [mouse-ipi-250309-contam.fasta]
  • mitochondrial ribosomal protein L54 precursor [Mus musculus] [NCBI-RefSeq_mouse_na_09-14-2009_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Mrpl54 39S ribosomal protein 54, mitochondrial precursor [ipi.MOUSE_jw_12may08.contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Mrpl54 39S ribosomal protein 54, mitochondrial precursor ENSMUSG00000034932 IPI00132091 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • 39S ribosomal protein L54, mitochondrial precursor [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00132091.1|SWISS-PROT:Q9CPW3|ENSEMBL:ENSMUSP00000039951|REFSEQ:NP_079593|VEGA:OTTMUSP00000039376 Tax_Id=10090 Gene_Symbol=Mrpl54 39S ribosomal protein L54, mitochondrial [ipi.MOUSE.fasta.20090209]
  • 39S ribosomal protein L54, mitochondrial OS=Mus musculus GN=Mrpl54 [011711_HMR.fasta]
  • 39S ribosomal protein L54, mitochondrial OS=Mus musculus GN=Mrpl54 PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q9CPW3|RM54_MOUSE 39S ribosomal protein L54, mitochondrial OS=Mus musculus GN=Mrpl54 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 135 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAHLLRAS RVWARWHPRA LPVLRRPGGF SIREYAKKPV GKGGKGGVAA EALKDPEVCT  60
   61 DPTQLTTHAM GVNIYKEGQD VALKADSEYP TWLFQVNLGP PKKLEELEPE SREYWRLLRK 120
  121 QNIWRHNRLS KNKKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] Pfam 48.167491 No description for PF08561.1 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle