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Protein Overview: STX1A_MOUSE

General Information:
Name(s) found: STX1A_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|72679879|gb|AAI00447.1| Syntaxin 1A (brain) [Mus musculus] [NCBI NR]
  • gi|20141656|sp|O35526.3|STX1A_MOUSE RecName: Full=Syntaxin-1A; AltName: Full=Neuron-specific antigen HPC-1 [NCBI NR]
  • gi|15011853|ref|NP_058081.2| syntaxin 1A (brain) [Mus musculus] [NCBI NR]
  • gi|148687447|gb|EDL19394.1| syntaxin 1A (brain), isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|14575595|dbj|BAA28865.2| HPC-1/syntaxin [Mus musculus] [NCBI NR]
  • Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3 [Swiss-Prot]
  • (O35526) Syntaxin-1A (Neuron-specific antigen HPC-1) [Swiss-Prot]
  • Ensembl_locations(Chr-bp):5-132631368 Syntaxin 1A [hmr_yeast5_DM3-1_pombe.fasta]
  • syntaxin 1A (brain); syntaxin 1 a [HMR_022704-rand.fasta]
  • Syntaxin-1A [ipi.MOUSE.v3.06.fasta]
  • syntaxin 1A (brain) [Mus musculus]gi|14575595|dbj|BAA28865.2| HPC-1/syntaxin [Mus musculus]gi|20141656|sp|O35526|ST1A_MOUSE Syntaxin-1A (Neuron-specific antigen HPC-1) [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Syntaxin-1A [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_016801) syntaxin 1A (brain); syntaxin 1 a [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • syntaxin 1A (brain) [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Syntaxin-1A (Neuron-specific antigen HPC-1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • syntaxin 1A (brain), isoform CRA_a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Syntaxin 1A (brain) [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • HPC-1/syntaxin [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 SYNTAXIN-1A [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Stx1a Syntaxin-1A [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Stx1a Syntaxin-1A ENSMUSG00000007207 IPI00131618 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • syntaxin-1A [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00131618.1|SWISS-PROT:O35526|TREMBL:Q497P1;Q5D0A4|ENSEMBL:ENSMUSP00000005509|REFSEQ:NP_058081|VEGA:OTTMUSP00000017437 Tax_Id=10090 Gene_Symbol=Stx1a Syntaxin-1A [ipi.MOUSE.fasta.20090209]
  • Syntaxin-1A OS=Mus musculus GN=Stx1a [011711_HMR.fasta]
  • sp|O35526|STX1A_MOUSE Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3 [uniprot.sptr.mouse.20130102]
  • tr|Q497P1|Q497P1_MOUSE Syntaxin 1A (Brain) OS=Mus musculus GN=Stx1a PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Syntaxin 1A (Brain) OS=Mus musculus GN=Stx1a PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Isoform of O35526, Syntaxin 1A (Brain) OS=Mus musculus GN=Stx1a PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDRTQELRT AKDSDDDDDV TVTVDRDRFM DEFFEQVEEI RGFIDKIAEN VEEVKRKHSA  60
   61 ILASPNPDEK TKEELEELMS DIKKTANKVR SKLKSIEQSI EQEEGLNRSS ADLRIRKTQH 120
  121 STLSRKFVEV MSEYNATQSD YRERCKGRIQ RQLEITGRTT TSEELEDMLE SGNPAIFASG 180
  181 IIMDSSISKQ ALSEIETRHS EIIKLETSIR ELHDMFMDMA MLVESQGEMI DRIEYNVEHA 240
  241 VDYVERAVSD TKKAVKYQSK ARRKKIMIII CCVILGIIIA STIGGIFG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..288] PSI-BLAST 37.69897 Syntaxin 1A N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SNAP receptor activity
    		•  3.50393203740159 bayes_pls_golite062009
  • protein transporter activity
    		•  2.96543140800925 bayes_pls_golite062009
  • protein binding
    		•  2.66728689880621 bayes_pls_golite062009
  • binding
    		•  2.33192450173199 bayes_pls_golite062009
  • SNARE binding
    		•  1.85060343142976 bayes_pls_golite062009
  • phosphatidic acid binding
    		•  1.77049713891414 bayes_pls_golite062009
  • transporter activity
    		•  1.74189664015129 bayes_pls_golite062009
  • myosin head/neck binding
    		•  1.62782051964352 bayes_pls_golite062009
  • extracellular ligand-gated ion channel activity
    		•  1.54368755758216 bayes_pls_golite062009
  • excitatory extracellular ligand-gated ion channel activity
    		•  1.54368755758216 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.49085442233849 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.33093805224337 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.13101548288086 bayes_pls_golite062009
  • calcium channel regulator activity
    		•  1.03966990325407 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.643064875848901 bayes_pls_golite062009
  • gated channel activity
    		•  0.621670335227137 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  0.41937155561589 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  0.41937155561589 bayes_pls_golite062009
  • extracellular-glutamate-gated ion channel activity
    		•  0.394485000881621 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.370484918396857 bayes_pls_golite062009
  • myosin heavy chain binding
    		•  0.29109171472743 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.0647076360772156 bayes_pls_golite062009
  • channel activity
    		•  0.0647076360772156 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.0435980899803177 bayes_pls_golite062009
  • phospholipid binding
    		•  0.0172309833091902 bayes_pls_golite062009
  • myosin binding
    		•  0.00404497798139003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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