YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: IPI:IPI00390323....

General Information:
Name(s) found: IPI:IPI00390323.2|ENSEMBL:ENSRNOP00000038037|REFSEQ:XP_219953 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
IPI:IPI00390323.2|REFSEQ_XP:XP_219953|ENSEMBL:ENSRNOP00000038037 [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta]
tr|F1M8X9|F1M8X9_RAT [20141208_RAT.fasta]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • Tax_Id=10116 PREDICTED: similar to Golgi-specific brefeldin A-resistance factor 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 PREDICTED: similar to Golgi-specific brefeldin A-resistance factor 1 [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta]
  • Protein Gbf1 OS=Rattus norvegicus GN=Gbf1 PE=4 SV=2 [20141208_RAT.fasta]
    • Organism: Rattus norvegicus
    Length: 1861 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    endoplasmic reticulum lumen [IDA]
    cis-Golgi network [IDA]
    mitochondrion [IDA]
    Golgi membrane [UNKNOWN]
    Golgi stack [IDA]
    intracellular [IEA]
    Biological Process: biological_process [ND]
    retrograde vesicle-mediated transport, Golgi to ER [UNKNOWN]
    cellular membrane organization [UNKNOWN]
    regulation of ARF protein signal transduction [IEA]
    COPI coating of Golgi vesicle [UNKNOWN]
    post-Golgi vesicle-mediated transport [UNKNOWN]
    Molecular Function: protein binding [UNKNOWN]
    ARF guanyl-nucleotide exchange factor activity [UNKNOWN][IEA]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDKNIYIIQ GEINIVVGAI KRNARWSTHI PLDEERDPLL HSFSHLKEVL NSGTELSEIE  60
   61 PNVFLRPFLE VIRSEDTTGP ITGLALTSVN KFLSCALIDP THEGTAEGME NMADAVTHAR 120
  121 FVGTDPASDE VVLMKILQVL RTLLLTPVGT HLTNESVCEI MQSCFRICFE MRLSELLRKS 180
  181 AEHTLVDMVQ LLFTRLPQFK EEPKSYVGTN LKKLKMRAGG MSDSSKWKKQ KRSPRPPRHT 240
  241 TKVMPGSELP TPNGAALSSN LTGGMPFIEA PTSISSASSE AASTVVSPCT DSGLELSSQA 300
  301 TSKEDLTDLE QAGSPREITT TEPGSTEIGV SDQLDPQEGA HVEKAQSASV ESIPEVLEEC 360
  361 TSPTDHSDSA SVHDMDYVNP RGVRFTQSSQ KEGTALVPYG LPCIRELFRF LISLTNPHDR 420
  421 HNSEVMIHMG LHLLTVALES APVAQCQTLL GLIKDEMCRH LFQLLSVERL NLYAASLRVC 480
  481 FLLFESMREH LKFQLEMYIK KLMEIITVEN PKMPYEMKEM ALEAIVQLWR IPSFVTELYI 540
  541 NYDCDYYCSN LFEDLTKLLS KNAFPVSGQL YTTHLLSLDA LLTVIDSTEA HCQAKVLNTL 600
  601 NQQEKKETAR PGFEAVDGSP DTYKSERAAS DGKATGVPSD APGLHFSSGG WLSTEHGKPG 660
  661 CSDLEEAGDS GVDKKTTRKP PRFSCLLPDP RELIEIKNKK KLLITGTEQF NQKPKKGIQF 720
  721 LQEKGLLTIP MDNTEVAQWL RENPRLDKKM IGEFVSDRKN MDLLESFVST FSFQGLRLDE 780
  781 ALRLYLEAFR LPGEAPVIHR LLEVFTEHWR SCNGSPFANS DACFALAYAV IMLNTDQHNH 840
  841 NVRKQNAPMT LEEFRKNLKG VNGGKDFEQD ILEDMYHAIK NEEIVMPEEQ TGLVRENYVW 900
  901 SVLLHRGATP EGIFLRVPPG SYDLDLFTMT WGPTIAALSY VFDKSLEETI IQKAISGFRK 960
  961 CAMISAHYGL SDVFDNLIIS LCKFTALSSE SIENLPSVFG SNPKAHIAAK TVFHLAHRHG1020
 1021 DILREGWKNI MEAMLQLFRA QLLPKAMVEV EDFVDPNGKI SLQREETPSN RGESTVLSFV1080
 1081 SWLTLSGPEQ SSVRGPSTEN QEAKRVALDC IKQCDPEKMI TESKFLQLES LQELMKALVS1140
 1141 VTPDEETYDE EDAAFCLEML LRIVLENRDR VGCVWQTVRD HLYHLCVQAQ DFCFLVERAV1200
 1201 VGLLRLAIRL LRREEISGQV LLSLRILLLM KPSVLSRVSH QVAYGLHELL KTNAANIHSG1260
 1261 DDWATLFTLL ECIGSGVKPP DALQATARAD APDAGAQSDS ELPSYHQNDV SLDRGYTSDS1320
 1321 EVYTDHGRPG KMHRSATDAD MANSGWLVVG KDDIDNSKPA AGLSRPGPSP LVNQYSLTVG1380
 1381 LDLGPHDTKS LLKCVESLSF IVRDAAHITP DNFELCVKTL RIFVEASLNG GCKSQDKRGK1440
 1441 SHKYDSKGNR FKKKPKEGSM LRRPRASSQH ATRAGHSDEE EDEGVPASYH TVSLQVSQDL1500
 1501 LDLMHTLHTR AASIYSSWAE EQRHLETGGR KIEADSRTLW AHCWCPLLQG IACLCCDARR1560
 1561 QVRMQALTYL QRALLVHDLQ KLDALEWESC FNKVLFPLLT KLLENISPAD VGGMEETRMR1620
 1621 ASTLLSKVFL QHLSPLLSLS TFAALWLTIL DFMDKYMHAG SSDLLSEAVP ESLKNMLLVM1680
 1681 DTAEIFHSAD ARGGSPSALW EITWERIDCF LPHLRDELFK QTVIQDPMPT EPHSQKPLAS1740
 1741 THLTPAAGDP RMPGHPPPPE IPSEVGACDP EKPESTRAAS SSSPGSPVAS SPSKQSPAPE1800
 1801 GPPPLAQPPL ILQPLTSPLQ VGVPPMTLPI ILNPALIEAT SPVPLLATPR PTDPIPTSEV1860
 1861 N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle