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Protein Overview: Reverse_YDR034C-D

General Information:
Name(s) found: Reverse_YDR034C-D [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
Description(s) found:
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  • YDR034C-D SGDID:S000007345, Chr IV from 519352-518060,518058-514039, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YDR034C-D SGDID:S0007345, Chr IV from 519352-518060,518058-514039, reverse complement, Ty ORF [yeast030305.revfasta]
  • YDR034C-D SGDID:S000007345, Chr IV from 519354-518062,518060-514041, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protei [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • YDR034C-D SGDID:S000007345, Chr IV from 519354-518062,518060-514041, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes" [scerevisihumanrev.fasta]
  • YDR034C-D SGDID:S000007345, Chr IV from 518062-514043,519356-518064, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes" [SGD_S_cerevisiae_S_bayanus_combined_01-01-2012_reversed.fasta]
    • Organism: SPECIES UNKNOWN
    Length: 1771 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
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    1 *HIWKNTLLK FTKIPLPKTM VDAINKKTEI YYVYLNNGSV EDRLRMAKTG FFRNRFKEEN  60
   61 TSKIISITSR SDTLLGKIIP KKNLEQVLHS LNNLLPIAES VAHIEAETTS TCTLSAKTSK 120
  121 GGIVKGNLLF INGIQSKYYP QNGYSADSIA VLKNDPKTPK NKHWILQKDR TDWMFQILEY 180
  181 TMDLVQRSPF LIHQALTNIY YLLDFRFKYG VYSALGILKQ MEHVKEKYED EDIELEDQDI 240
  241 YHGPQGPARL KKGKPNLPVN LKPLKETLSK EMGLKMYKSR QYKIELGLID YQIENDGEGL 300
  301 NIIKTDYQKK LTTIIKKNAN LDKSFLIMDD VFLCITVQSN KFVCSWGRVE QMDCCNILYS 360
  361 KITEYWNAGS QKLGYLSKRL RLLKDNLGLH PPPRIYLEEK IDAYLYASSI DLQTIYYDND 420
  421 LAISLSTMLA YHHVTNSQMD SDYTDPHQID GRAVFRAKHT GDRKKNFIFM SNIVKKPDID 480
  481 NRDYYKNTDW TNMRLLQNIE KHYAEIYRDK EKNDENYTIA EDYRLTTRVP KISKVGKIAA 540
  541 ILNIRKKSRP PELSRMNKNN WTDRSVEIET ENDELSRKKS KTTTLVNSDD MGGLSSNTQR 600
  601 SHIHPIDKSV DSTDTPSKNT LDPLPLDDLI SDATVNKSSK DPMINPTAHD SSRYEPPDTD 660
  661 ISPTNDCAAK TEISIIPTTS ESNSSRDDIS PTSNTTRYKI NTDSNRQIYP EETGGLRTTK 720
  721 INELGYNVRD QSTLDIMDNP SGPRKQNRAT FTSSHRPSTT DSEITGGMET SEKNIIHPTR 780
  781 SRITSPLINY ESIDADVEKP ARVKQVPEKD LQLPNISQSS FDNVLPDSNI EIESQYDHDS 840
  841 ETNQDYSQET ENKEIFSQNH ATLRNLDDDF TLTDYNFQDL KSQKDQLIVY NTTDVTKKLS 900
  901 PLYIIYGYSN RSPHLAYGPI GRPHIKSDPN HNNVIVPQGF PLITTIDLGA LGAHQRASKD 960
  961 NKPSVLSNRI ITSFEVASFW LHNPLGSCHL LTRCDNLLTR NLREAVGHAR SDATTTYCAT1020
 1021 IGRNTFFKHL TKNTYESGRD MQIVLVRANF QNKIFALIST FVNLISEERR DHLPYVWQFR1080
 1081 TKEDTFSIFY SPASKPLHHV PGFIDTHLYQ FPEYSEQYKL RSGKVHRHKT SKGILCDPCQ1140
 1141 YTSANSWEID SEKLYTVANK KLSKQISRFN AHGLMRHILP YPYKNVSKSK NVNNITLKSI1200
 1201 HSPILYKKSL WYFDGHKVIP ALVTGDSREL TNRTFCATIN QNALESLSLL DYAINPTHLA1260
 1261 KISTKTGNQF NFHLNGIANI PIDQKQADVI NIESNPTAHH LYHASRVLTQ SAGSDILLHD1320
 1321 PLEDNSDITH TPKSEKQQQG LSLENDDSLY QSSVTSENIH DNNVRSFKSS TAINHAKAAR1380
 1381 PKSSNTRQYN RTTVKTNTTN PSTRSVNKYE SHQKYQSPKN LNMIKNEDYI LQIEAFLQSL1440
 1441 KMNTKTRYQN RLYKFDGSLG KLILQCALRD SVNINNEKLR QIITSVTIEF TDASTSGDYE1500
 1501 LNALAIWDKL EQNNTQMKSV SKCLVTLIDA YNIELIQKVW TPLLHFPAFA QFTNYIYAHE1560
 1561 EYTMQRKIEG QDNPIIDGLN SNKLFRIYFK VWTSFNEEST LTHPPLVNNG VKTKAQPIES1620
 1621 HQNKLDIPDP SSTSLPPIYQ PLPYHPDPQY YAPSTQYHSC TMMSPQQYHA WNSAMAKNPT1680
 1681 MMGHQQYQGN QPPPVSAPQP SVHHHNEPVA STGPTTEQQS NVKTSDRDFE PLNSASVALP1740
 1741 DQNSPVEKST VSAYASGHLN PSNQSLQQSE M

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data

    No structure prediction data found for this protein.
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle