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Protein Overview: SPT4_CANAL

General Information:
Name(s) found: SPT4_CANAL [Swiss-Prot]
Description(s) found:
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  • gi|74587492|sp|Q5AK73.1|SPT4_CANAL RecName: Full=Transcription elongation factor SPT4; AltName: Full=Chromatin elongation factor SPT4 [NCBI NR]
  • Transcription elongation factor SPT4 OS=Candida albicans GN=SPT4 PE=3 SV=1 [Swiss-Prot]
  • orf19.3947 CGDID:CAL0002982 Assembly 19, Contig19-10194 (87505, 87843) CDS, translated using codon table 12 (112 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.3947 CGDID:CAL0002982 Assembly 19, Contig19-20194 (87587, 87925) CDS, translated using codon table 12 (112 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • Transcription elongation factor SPT4 (Chromatin elongation factor SPT4) [nr-271106-contam.fasta]
  • Transcription elongation factor SPT4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SPT4 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Candida albicans
    Length: 112 amino acids

    Gene Ontology:
    Cellular Component: DSIF complex [IEA]
    rDNA heterochromatin [IEA]
    kinetochore [IEA]
    nuclear chromosome, telomeric region [IEA]
    Biological Process: transcription-coupled nucleotide-excision repair [IEA]
    chromosome segregation [IEA]
    chromatin silencing [IEA]
    regulation of transcription from RNA polymerase I promoter [IEA]
    RNA elongation from RNA polymerase II promoter [IEA]
    Molecular Function: RNA polymerase II transcription elongation factor activity [IEA]
    RNA polymerase I transcription factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRSERACM LCGIIQPMKS FIDYGCPNCE SLLHYQYNDN KQVQDCTSPS FEGLVALGED  60
   61 NKGSWVARWL RIDSFTAGLY AVKVNGKLPP SIIAELEEQN VIYRPRDGSA ED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle