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Protein Overview: CE39789

General Information:
Name(s) found: CE39789 [WormBase]
Description(s) found:
Found 10 descriptions.
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  • WBGene00020903 status:Partially_confirmed UniProt:O01664 protein_id:CCD68367.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 684 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    sodium channel activity [IEALink to PubMed article]
    amiloride-sensitive sodium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLQVHFQSG SYDDDMSNSP SSSCSTVGDM PNIKPSASKG SFLSELKPFS KRASQLIVDV  60
   61 PVAHLRKIKN TEGVSSITRE SEHFSNTTTL HGPKRIYNGK GWSCVFWVFI WISSMIMLLT 120
  121 QVTSLISMYI SKPTVSQVSF LLSEGGMQFP RVTVCSFNPI KRTTVEALNS TKDLSDDLLD 180
  181 YLMMFNSDAM TLYGRADAAS LHSGDNVFKH YVSSHPNFTA DNFFMDAGFS CGDMFKMCSF 240
  241 GGRRFDCCKY ATPIFSDLGK CFTLNLQGSD KSWMKMQTEP GIAAGLQIIL DSHLEEQFDS 300
  301 ETDGVTPVFS SAFENGFRFY IHSSEEIPFL ASEGIAVSPD SVVYSALSSS KYILLSSNAW 360
  361 GNCSDSWPRG YDYSFPYTSA MCSTMCKAQY FQNLCGCSPS IYNHLNRFND CTPYETFICM 420
  421 DTKMKKVVNQ SFNIEMPTCE ECKVECKSQV YHSFNSYGKG LSRGALMWLT KQGKQETWTI 480
  481 PHMKLNFQVV NVFFRDMSYT EYIQKRGMSL TELLSDIGGN MGMFMGMSVF TIIELFLFLS 540
  541 KIGWIGFSRK RRDYMYSKKK NEEMHEKELE DVVTGFKLFR HRKSGKDMSH LREKIKGLSM 600
  601 HRVTSEQLNV CKLAWENEPD IERRLASVTR QNSALKEHKD YKQPTILPFD LKDIKDQITR 660
  661 GRAASMFRSR RSRSETAPAV IHEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] MSA 1.172994 View MSA. No confident structure predictions are available.
    2 View Details [75..565] PSI-BLAST 109.0 No description for 2qtsA was found.
    3 View Details [566..684] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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