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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE39789
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLQVHFQSG SYDDDMSNSP SSSCSTVGDM PNIKPSASKG SFLSELKPFS KRASQLIVDV  60
   61 PVAHLRKIKN TEGVSSITRE SEHFSNTTTL HGPKRIYNGK GWSCVFWVFI WISSMIMLLT 120
  121 QVTSLISMYI SKPTVSQVSF LLSEGGMQFP RVTVCSFNPI KRTTVEALNS TKDLSDDLLD 180
  181 YLMMFNSDAM TLYGRADAAS LHSGDNVFKH YVSSHPNFTA DNFFMDAGFS CGDMFKMCSF 240
  241 GGRRFDCCKY ATPIFSDLGK CFTLNLQGSD KSWMKMQTEP GIAAGLQIIL DSHLEEQFDS 300
  301 ETDGVTPVFS SAFENGFRFY IHSSEEIPFL ASEGIAVSPD SVVYSALSSS KYILLSSNAW 360
  361 GNCSDSWPRG YDYSFPYTSA MCSTMCKAQY FQNLCGCSPS IYNHLNRFND CTPYETFICM 420
  421 DTKMKKVVNQ SFNIEMPTCE ECKVECKSQV YHSFNSYGKG LSRGALMWLT KQGKQETWTI 480
  481 PHMKLNFQVV NVFFRDMSYT EYIQKRGMSL TELLSDIGGN MGMFMGMSVF TIIELFLFLS 540
  541 KIGWIGFSRK RRDYMYSKKK NEEMHEKELE DVVTGFKLFR HRKSGKDMSH LREKIKGLSM 600
  601 HRVTSEQLNV CKLAWENEPD IERRLASVTR QNSALKEHKD YKQPTILPFD LKDIKDQITR 660
  661 GRAASMFRSR RSRSETAPAV IHEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle