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Protein Overview: ccb-1

General Information:
Name(s) found: ccb-1 / CE39788 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00000368 locus:ccb-1 status:Partially_confirmed UniProt:O01661 protein_id:CCD68365.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 526 amino acids

    Gene Ontology:
    Cellular Component: presynaptic active zone [IDA]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    calcium ion transport [IEALink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: voltage-gated calcium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRRRGSGD SNFSHHDELE LEAGNRETLR RDAERQAALQ LERAKYKPVA FAVCTNVEYD  60
   61 GSVDDDSPVH GCAVSFKVKD FLHIKEKYNN DWWIGRLVKE GHDLGFIPSP VKLESLRQQT 120
  121 AKSGKFKQST SATNLGALDN MMPRSGSRGS TPPTPDDDEY NAKKMTNIVT TPPTKEKKKL 180
  181 IFKKVQQENV PPYDVVPSMR PVVLVGPSLK GYEVTDMMQK AVFDYLKHRF EGRIIITRVT 240
  241 ADISLAKRSL LNNPNKRAMM ERANSRTSNS LAEIQTEIER IFELARSMQL VVLDCDTINH 300
  301 PSQLAKTSLA PIHVYIKISS PKVLQRLIKS RGKSQSRNMN VQMVAAEKLA QCQAELFDVL 360
  361 LDENQLEDAC EHLADFMEAY WRATHPPVRS PPRIKRNPME NRGPSTLFTP AQMMQGFQGN 420
  421 AGQLPPQLQP QQSIASMSQM GGPMGSMNPP YLAPPMQSGR PGMPSISVQQ ATGSYGGMQQ 480
  481 QPQQQQPMQS APPPAPQRQT SYDRHGFDEY DDMDMSHQYE RGTYRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..384] PSI-BLAST 69.221849 beta4 subunit of Ca2+ channel
    2 View Details [385..526] MSA 6.308997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.821105381274365 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle