YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: NEP1_MOUSE

General Information:
Name(s) found: NEP1_MOUSE [Swiss-Prot]
Description(s) found:
Found 34 descriptions.
SHOW ALL
  • Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus musculus GN=Emg1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAASGGFQP RERRFSVQEQ DWETTPPKKL RLGAGSKCGG RRLIVVLEGA SLETVKVGKT  60
   61 YELLNCDRHK SMLLKNGRDP GEVRPDITHQ SLLMLMDSPL NRAGLLQVYI HTQKNVLIEV 120
  121 NPQTRIPRTF DRFCGLMVQL LHKLSVRAAD GPQKLLKVIK NPVSDHFPVG CMKIGTSFSV 180
  181 EDISDIRELV PSSDPVVFVV GAFAHGKVSV EYTEKMVSIS NYPLSAALTC AKVTTAFEEV 240
  241 WGVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 85.69897 No description for 2v3kA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA methyltransferase activity
    		•  3.73300070859272 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  2.75506106783732 bayes_pls_golite062009
  • methyltransferase activity
    		•  2.52574509568717 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  2.44351066049012 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  2.00166711852993 bayes_pls_golite062009
  • RNA binding
    		•  1.99948490385053 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
    		•  1.9680534181971 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  1.94772102267592 bayes_pls_golite062009
  • binding
    		•  1.07947949398964 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.987186921436979 bayes_pls_golite062009
  • catalytic activity
    		•  0.797300463760338 bayes_pls_golite062009
  • transferase activity
    		•  0.489526737652591 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  0.425953878527171 bayes_pls_golite062009
  • protein binding
    		•  0.303628351374506 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle